Hs04065182_cn

• Gene Symbol: TSPEAR
• Assay Reference Genome Location: Chr.21:44518880 on build GRCh38
• Cytoband: 21q22.3

Target Gene Details

• Entrez Gene ID: 54084
• Gene Name: thrombospondin type laminin G domain and EAR repeats
• Gene Aliases: C21orf29, DFNB98, TSP-EAR
• Location: Chr.21:44497892-44711580 on Build GRCh38
• Assay Gene Location: Within Intron 10

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TSPEAR	NM_001272037.1			NP_001258966.1
	NM_144991.2			NP_659428.2
	AJ487962.1			CAD32309.1
	BC021197.2			AAH21197.2
	BC115415.1

Target Gene Details

• Entrez Gene ID: 114043
• Gene Name: TSPEAR antisense RNA 2
• Gene Aliases: C21orf90
• Location: Chr.21:44517215-44518977 on Build GRCh38
• Assay Gene Location: Within Exon 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TSPEAR-AS2	NR_026547.1	3	948
	NR_026548.1	2	874
	DA908807.1	2	469

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv587803	Chr.21:44514317 - 44569605 on Build GRCh38	Loss	KRTAP10-2 TSPEAR-AS2 TSPEAR KRTAP10-3 TSPEAR-AS1 KRTAP10-1
nsv953646	Chr.21:44279118 - 44523117 on Build GRCh38	Deletion	PFKL TSPEAR-AS2 TSPEAR C21orf2 TRPM2-AS AIRE TRPM2 LOC100505727 LRRC3 TSPEAR-AS1 LRRC3-AS1
nsv587804	Chr.21:44518690 - 44524026 on Build GRCh38	Loss	TSPEAR-AS2 TSPEAR
nsv1058359	Chr.21:44304172 - 44547662 on Build GRCh38	Gain	PFKL TSPEAR-AS2 TSPEAR C21orf2 TRPM2-AS TRPM2 LOC100505727 LRRC3 TSPEAR-AS1 LRRC3-AS1 KRTAP10-1
esv2723638	Chr.21:44249174 - 44593709 on Build GRCh38	Deletion	TSPEAR C21orf2 TRPM2 LOC100505727 TSPEAR-AS1 LRRC3-AS1 KRTAP10-1 KRTAP10-2 PFKL TSPEAR-AS2 KRTAP10-3 KRTAP10-5 KRTAP10-6 KRTAP10-4 TRPM2-AS AIRE LRRC3 DNMT3L LOC105372833
nsv1055163	Chr.21:44475780 - 44646211 on Build GRCh38	Gain	KRTAP10-7 KRTAP10-8 TSPEAR LOC100505727 TSPEAR-AS1 KRTAP10-9 KRTAP10-1 KRTAP10-2 TSPEAR-AS2 KRTAP10-3 KRTAP10-5 KRTAP10-6 KRTAP10-4 KRTAP10-10
esv33817	Chr.21:43749531 - 44647625 on Build GRCh38	Loss	KRTAP10-7 CSTB KRTAP10-8 PWP2 TSPEAR PDXK C21orf2 AATBC C21orf33 TRPM2 LOC100505727 LRRC3-AS1 KRTAP10-9 PFKL KRTAP10-5 KRTAP10-4 TRPM2-AS KRTAP10-10 AIRE ICOSLG KRTAP10-11 AGPAT3 TSPEAR-AS1 KRTAP10-1 KRTAP10-2 RRP1 TSPEAR-AS2 KRTAP10-3 KRTAP10-6 LRRC3 TRAPPC10 DNMT3L LOC105372833

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

intercellular signal molecule

Gene Ontology Categories:

Process(es)

sensory perception of sound

Function(s)

molecular_function