Genomic Map
Back To TopAssay Details
Target Gene Details
Entrez Gene ID: | 7226 |
Gene Name: | transient receptor potential cation channel subfamily M member 2 |
Gene Aliases: |
EREG1, KNP3, LTRPC2, LTrpC-2, NUDT9H, NUDT9L1, TRPC7 |
Location: |
Chr.21:44350112-44443081 on Build GRCh38 |
Assay Gene Location: | Within Intron 21 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| TRPM2 | NM_001320350.1 | NP_001307279.1 | ||
| NM_001320351.1 | NP_001307280.1 | |||
| NM_003307.3 | NP_003298.1 | |||
| NR_038257.1 | ||||
| XM_005261171.3 | XP_005261228.1 | |||
| XM_011529736.2 | XP_011528038.1 | |||
| XM_017028456.1 | XP_016883945.1 | |||
| XM_017028457.1 | XP_016883946.1 | |||
| AB001535.1 | BAA34700.1 | |||
| AB166745.1 | BAD83705.1 | |||
| AB166746.1 | BAD83706.1 | |||
| AJ417076.1 | CAD01139.1 | |||
| AJ878416.1 | CAI47593.1 | |||
| AK301451.1 | ||||
| BC112342.1 |
Target Gene Details
Entrez Gene ID: | 101928607 |
Gene Name: | TRPM2 antisense RNA |
Gene Aliases: |
TRPM2-AS1 |
Location: |
Chr.21:44414590-44425563 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| TRPM2-AS | NR_109964.1 | |||
| AK057275.1 | 1 | 1602 | ||
| EU362988.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv519245 | Chr.21:44413029 - 44429252 on Build GRCh38 | Loss |
 TRPM2-AS
TRPM2
|
| nsv953646 | Chr.21:44279118 - 44523117 on Build GRCh38 | Deletion |
LRRC3
PFKL
TSPEAR-AS2
TRPM2-AS
LRRC3-AS1
LOC100505727
TRPM2
C21orf2
TSPEAR
TSPEAR-AS1
AIRE
|
| nsv1058359 | Chr.21:44304172 - 44547662 on Build GRCh38 | Gain |
LRRC3
KRTAP10-1
PFKL
TSPEAR-AS2
TRPM2-AS
LRRC3-AS1
LOC100505727
TRPM2
C21orf2
TSPEAR
TSPEAR-AS1
|
| esv2723638 | Chr.21:44249174 - 44593709 on Build GRCh38 | Deletion |
KRTAP10-1
LOC105372833
KRTAP10-2
TRPM2-AS
KRTAP10-6
LOC100505727
TSPEAR
TSPEAR-AS1
AIRE
LRRC3
KRTAP10-4
PFKL
DNMT3L
TSPEAR-AS2
LRRC3-AS1
KRTAP10-3
TRPM2
C21orf2
KRTAP10-5
|
| nsv509800 | Chr.21:44284048 - 44471571 on Build GRCh38 | Insertion |
LRRC3
PFKL
TRPM2-AS
LRRC3-AS1
TRPM2
C21orf2
AIRE
|
| nsv587740 | Chr.21:44209682 - 44429981 on Build GRCh38 | Loss |
PFKL
DNMT3L
LOC105372833
TRPM2-AS
TRPM2
C21orf2
ICOSLG
AIRE
|
| nsv587781 | Chr.21:44344514 - 44447588 on Build GRCh38 | Loss |
TRPM2-AS
TRPM2
|
| esv33817 | Chr.21:43749531 - 44647625 on Build GRCh38 | Loss |
PDXK
LOC105372833
KRTAP10-2
KRTAP10-8
TSPEAR-AS1
ICOSLG
AGPAT3
PFKL
KRTAP10-7
DNMT3L
TSPEAR-AS2
LRRC3-AS1
KRTAP10-3
C21orf33
KRTAP10-5
KRTAP10-1
KRTAP10-11
TRPM2-AS
KRTAP10-6
LOC100505727
PWP2
TSPEAR
AIRE
LRRC3
KRTAP10-4
AATBC
TRAPPC10
KRTAP10-9
CSTB
TRPM2
C21orf2
KRTAP10-10
RRP1
|
Back To TopMore Information
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
Back To Top