Hs04079020_cn

• Gene Symbol: PHF5A
• Assay Reference Genome Location: Chr.22:41460805 on build GRCh38
• Cytoband: 22q13.2

Target Gene Details

• Entrez Gene ID: 84844
• Gene Name: PHD finger protein 5A
• Gene Aliases: INI, Rds3, SAP14b, SF3B7, SF3b14b, bK223H9.2
• Location: Chr.22:41459717-41468704 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PHF5A	NM_032758.3			NP_116147.1
	BC007321.2			AAH07321.1
	BC075808.1			AAH75808.1
	BU584712.1
	CR456398.1			CAG30284.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv834207	Chr.22:41282650 - 41463790 on Build GRCh38	Loss	ZC3H7B LOC100996598 PHF5A TOB2 TEF RANGAP1
nsv516925	Chr.22:41252498 - 41585953 on Build GRCh38	Loss	ZC3H7B CSDC2 LOC100996598 PHF5A ACO2 TOB2 LOC105373044 PMM1 TEF POLR3H MIR6889 RANGAP1
nsv834208	Chr.22:41363612 - 41554028 on Build GRCh38	Loss	LOC100996598 PHF5A ACO2 TOB2 LOC105373044 TEF POLR3H
nsv524585	Chr.22:40993505 - 41794305 on Build GRCh38	Loss	EP300-AS1 MEI1 ZC3H7B SNU13 EP300 MIR1281 CSDC2 ACO2 TOB2 LOC105373044 CHADL MIR6889 C22orf46 SNORD140 XRCC6 LOC100996598 L3MBTL2 PHF5A DESI1 PMM1 TEF POLR3H RANGAP1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

mRNA splicing, via spliceosome
transcription, DNA-templated
positive regulation of transcription, DNA-templated

Function(s)

DNA binding
transcription factor activity, sequence-specific DNA binding
poly(A) RNA binding