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Gene Symbol
RTN4R
Assay Reference Genome
Location

Chr.22:20249765 on build GRCh38
Cytoband
22q11.21
Assay ID Hs04083943_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 65078

Gene Name:

 reticulon 4 receptor

Gene Aliases:

 NGR, NOGOR

Location:

 Chr.22:20241415-20268293 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
RTN4R NM_023004.5 NP_075380.1
AF283463.1 AAG53612.1
AL834449.1 CAD39109.1
BC011787.1 AAH11787.1
BM762412.1
CR456360.1 CAG30246.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3893434 Chr.22:19470889 - 20343372 on Build GRCh38 Gain GNB1L RANBP1 MIR1286 COMT CCDC188 LINC00896 UFD1L DGCR6L MIR6816 CDC45 LOC101927859 TANGO2 MIR4761 RTN4R ARVCF ZDHHC8 TBX1 C22orf29 TXNRD2 SEPT5 LINC00895 DGCR8 MIR1306 TRMT2A SEPT5-GP1BB MIR3618 MIR185 LOC440792 LOC284865 CLDN5 GP1BB
nsv828938 Chr.22:19691069 - 20324465 on Build GRCh38 Gain GNB1L RANBP1 MIR1286 COMT CCDC188 LINC00896 DGCR6L MIR6816 TANGO2 MIR4761 RTN4R ARVCF ZDHHC8 TBX1 C22orf29 TXNRD2 SEPT5 DGCR8 MIR1306 TRMT2A SEPT5-GP1BB MIR3618 MIR185 LOC440792 LOC284865 GP1BB
esv3893435 Chr.22:20230714 - 20307897 on Build GRCh38 Gain LOC440792 MIR1286 RTN4R
nsv471183 Chr.22:20018517 - 20319470 on Build GRCh38 Loss RANBP1 MIR1286 DGCR8 MIR1306 TRMT2A CCDC188 LINC00896 DGCR6L MIR6816 MIR3618 MIR185 LOC440792 LOC284865 TANGO2 RTN4R ZDHHC8
dgv7983n54 Chr.22:19762002 - 20321870 on Build GRCh38 Gain C22orf29 TXNRD2 GNB1L RANBP1 MIR1286 DGCR8 COMT MIR1306 TRMT2A CCDC188 LINC00896 DGCR6L MIR6816 MIR3618 MIR185 LOC440792 LOC284865 TANGO2 MIR4761 RTN4R ARVCF ZDHHC8 TBX1
dgv726n67 Chr.22:20070444 - 20324465 on Build GRCh38 Gain RANBP1 MIR1286 DGCR8 MIR1306 TRMT2A CCDC188 LINC00896 DGCR6L MIR6816 MIR3618 LOC440792 LOC284865 RTN4R ZDHHC8
nsv834134 Chr.22:20138527 - 20257923 on Build GRCh38 Loss LOC284865 MIR1286 RTN4R ZDHHC8 CCDC188 LINC00896
esv2758825 Chr.22:20038970 - 20321924 on Build GRCh38 Loss RANBP1 MIR1286 DGCR8 MIR1306 TRMT2A CCDC188 LINC00896 DGCR6L MIR6816 MIR3618 LOC440792 LOC284865 TANGO2 RTN4R ZDHHC8
nsv828939 Chr.22:19696032 - 20324465 on Build GRCh38 Loss GNB1L RANBP1 MIR1286 COMT CCDC188 LINC00896 DGCR6L MIR6816 TANGO2 MIR4761 RTN4R ARVCF ZDHHC8 TBX1 C22orf29 TXNRD2 SEPT5 DGCR8 MIR1306 TRMT2A SEPT5-GP1BB MIR3618 MIR185 LOC440792 LOC284865 GP1BB
dgv4480n100 Chr.22:20069620 - 20262667 on Build GRCh38 Gain MIR6816 MIR3618 RANBP1 LOC284865 MIR1286 DGCR8 RTN4R MIR1306 ZDHHC8 TRMT2A CCDC188 LINC00896
dgv4481n100 Chr.22:20114567 - 20291605 on Build GRCh38 Gain MIR6816 RANBP1 LOC284865 MIR1286 RTN4R ZDHHC8 TRMT2A CCDC188 LINC00896
dgv4482n100 Chr.22:20184066 - 20280182 on Build GRCh38 Gain LOC284865 MIR1286 RTN4R LINC00896
nsv953027 Chr.22:20085378 - 20303977 on Build GRCh38 Deletion RANBP1 MIR1286 DGCR8 MIR1306 TRMT2A CCDC188 LINC00896 MIR6816 MIR3618 LOC440792 LOC284865 RTN4R ZDHHC8

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More Information


Additional Information:

For this assay, SNP(s) [rs117333152] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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