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See other SNAP47 CNV Assays ›
Gene Symbol
SNAP47
Assay Reference Genome
Location

Chr.1:227738647 on build GRCh38
Cytoband
1q42.13
Assay ID Hs04209247_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 116841

Gene Name:

 synaptosome associated protein 47

Gene Aliases:

 C1orf142, ESFI5812, HEL-S-290, HEL170, SNAP-47, SVAP1

Location:

 Chr.1:227728168-227781231 on Build GRCh38

Assay Gene Location:

 Within Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SNAP47 NM_001323930.1 NP_001310859.1
NM_001323931.1 NP_001310860.1
NM_001323932.1 NP_001310861.1
NM_001323933.1 NP_001310862.1
NM_001323934.1 NP_001310863.1
NM_001323935.1 NP_001310864.1
NM_053052.3 NP_444280.2
NR_136654.1
NR_136655.1
NR_136656.1
NR_136657.1
XM_006711734.3 XP_006711797.1
XM_017000231.1 XP_016855720.1
XM_017000232.1 XP_016855721.1
AK054633.1 BAB70779.1
AY090635.2 AAM09082.1
BC007786.2 AAH07786.2
BC011145.1 AAH11145.1
BC018760.1 AAH18760.2
BC032775.1 AAH32775.1
BX648570.1 CAI45994.1
GQ472206.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1007479 Chr.1:227508167 - 227796765 on Build GRCh38 Gain JMJD4 LOC105373289 SNAP47 ZNF678
nsv826908 Chr.1:227707685 - 228503399 on Build GRCh38 Gain JMJD4 HIST3H2BB WNT3A RNF187 LOC101927401 LOC100506571 MIR6742 MIR3620 ARF1 HIST3H3 GUK1 MIR4666A TRIM17 MRPL55 LOC105373289 IBA57 C1orf145 C1orf35 TRIM11 PRSS38 IBA57-AS1 GJC2 SNAP47 LOC101060022 MIR5008 WNT9A LOC107985355 OBSCN HIST3H2A
esv32853 Chr.1:227692415 - 228670462 on Build GRCh38 Gain RNA5S13 RNA5S17 RNF187 MIR6742 RNA5S3 RNA5S1 HIST3H3 RNA5S6 MRPL55 LOC105373289 C1orf145 C1orf35 WNT9A LOC107985355 LOC105373132 HIST3H2A RHOU RNA5S12 JMJD4 HIST3H2BB WNT3A LOC101927401 LOC100506571 RNA5S10 MIR3620 ARF1 GUK1 MIR4666A TRIM17 RNA5S7 RNA5S16 IBA57 RNA5S8 RNA5S9 TRIM11 PRSS38 RNA5S14 RNA5S11 RNA5S5 IBA57-AS1 GJC2 DUSP5P1 SNAP47 RNA5S15 RNA5S4 LOC101060022 MIR5008 RNA5S2 OBSCN BTNL10
nsv515496 Chr.1:227724773 - 227780237 on Build GRCh38 Loss JMJD4 SNAP47

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

SNARE protein

Gene Ontology Categories:

Function(s) Process(es)


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