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See other RNF223 CNV Assays ›
Gene Symbol
RNF223
Assay Reference Genome
Location

Chr.1:1067641 on build GRCh38
Cytoband
1p36.33
Assay ID Hs04213079_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 401934

Gene Name:

 ring finger protein 223

Gene Aliases:

 -

Location:

 Chr.1:1065635-1074307 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
RNF223 XM_017001286.1 XP_016856775.1
XM_017001287.1 XP_016856776.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv945741 Chr.1:1007194 - 1092619 on Build GRCh38 Duplication LOC105378948 C1orf159 RNF223 ISG15 AGRN LOC100288175
nsv509146 Chr.1:1010510 - 1111188 on Build GRCh38 Insertion LOC105378948 C1orf159 RNF223 ISG15 AGRN LOC100288175
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain LOC105378948 KLHL17 LOC100130417 PLEKHN1 RNF223 ISG15 AGRN PERM1 NOC2L LOC284600 C1orf159 HES4 LOC107985728 SAMD11 LOC100288175
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss MTND2P28 DVL1 MTND1P23 LOC107984841 PERM1 LOC100506504 MIR6726 ATAD3C NADK SAMD11 LOC100288175 ATAD3A WASH7P PUSL1 SCNN1D AGRN ANKRD65 CDK11A MIR6859-2 MORN1 LOC105378948 MMP23A ACAP3 ISG15 MIR6808 LOC101928626 LOC105378589 MIR200A LOC105378949 LOC107985729 SLC35E2B MMP23B MIR200B LOC105378947 MIR6859-1 CCNL2 LOC100129534 TMEM240 LOC100133331 LOC148413 CPSF3L OR4F29 MIB2 VWA1 AURKAIP1 LOC729737 FAM87B CFAP74 TNFRSF4 MIR6727 TMEM52 UBE2J2 LOC100288069 MIR1302-2 DDX11L1 LOC102724312 FAAP20 LINC00115 GABRD SSU72 MXRA8 KLHL17 OR4F5 NOC2L CDK11B LOC100287934 FAM138A FAM41C LOC105378592 LINC01342 PRKCZ TMEM88B SKI LOC105378591 LOC100130417 PLEKHN1 SDF4 LOC284600 CALML6 FAM132A LOC100134822 HES4 ATAD3B LOC107985728 TTLL10-AS1 TTLL10 SLC35E2 TAS1R3 B3GALT6 CPTP MRPL20 OR4F16 RNF223 MIR429 TNFRSF18 LINC01128 C1orf159 LOC102725121 MIR6723 GNB1 LOC100132287 FNDC10
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion LOC105378948 KLHL17 LOC100130417 PLEKHN1 RNF223 ISG15 AGRN PERM1 NOC2L LOC284600 C1orf159 HES4 LOC107985728 SAMD11 LOC100288175
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication LOC105378948 TNFRSF4 MIR6727 ACAP3 SDF4 UBE2J2 MIR6726 MIR200A FAM132A TTLL10-AS1 TTLL10 LOC100288175 MIR200B TAS1R3 B3GALT6 CPTP RNF223 PUSL1 SCNN1D MIR429 AGRN TNFRSF18 CPSF3L C1orf159 LINC01342
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain LOC105378948 TNFRSF4 LOC100130417 PLEKHN1 ISG15 SDF4 PERM1 LOC284600 MIR200A HES4 LOC107985728 SAMD11 TTLL10-AS1 TTLL10 LOC100288175 MIR200B KLHL17 RNF223 MIR429 AGRN TNFRSF18 NOC2L FAM41C C1orf159 LINC01342
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss TNFRSF4 MIR6727 DVL1 PERM1 UBE2J2 LOC100288069 MIR6726 ATAD3C NADK LOC102724312 SAMD11 LINC00115 LOC100288175 ATAD3A SSU72 MXRA8 KLHL17 PUSL1 SCNN1D AGRN ANKRD65 NOC2L CDK11B LOC100287934 FAM41C CDK11A LINC01342 TMEM88B LOC105378948 MMP23A LOC100130417 PLEKHN1 ACAP3 ISG15 SDF4 MIR6808 LOC284600 MIR200A FAM132A HES4 ATAD3B LOC107985728 TTLL10-AS1 LOC107985729 SLC35E2B TTLL10 MMP23B MIR200B SLC35E2 TAS1R3 CCNL2 B3GALT6 CPTP MRPL20 RNF223 TMEM240 MIR429 TNFRSF18 LINC01128 LOC148413 CPSF3L C1orf159 MIB2 VWA1 AURKAIP1 FAM87B FNDC10
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain LOC105378948 MTND2P28 LOC100130417 PLEKHN1 MTND1P23 LOC107984841 ISG15 PERM1 LOC101928626 LOC100288069 LOC284600 HES4 LOC107985728 SAMD11 LINC00115 LOC100288175 LOC105378947 KLHL17 OR4F16 RNF223 AGRN LOC100133331 NOC2L LOC100287934 LINC01128 FAM41C C1orf159 MIR6723 FAM87B
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss LOC105378948 TNFRSF4 LOC100130417 PLEKHN1 ISG15 SDF4 PERM1 UBE2J2 LOC284600 MIR200A FAM132A HES4 LOC107985728 SAMD11 TTLL10-AS1 LINC00115 TTLL10 LOC100288175 MIR200B KLHL17 B3GALT6 RNF223 MIR429 AGRN TNFRSF18 NOC2L LINC01128 FAM41C C1orf159 LINC01342 FAM87B
nsv1013524 Chr.1:939510 - 1161955 on Build GRCh38 Gain LOC105378948 KLHL17 PLEKHN1 RNF223 ISG15 AGRN PERM1 NOC2L C1orf159 LINC01342 HES4 SAMD11 LOC100288175
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion LOC105378948 TNFRSF4 KLHL17 PLEKHN1 RNF223 ISG15 MIR429 AGRN SDF4 PERM1 TNFRSF18 NOC2L C1orf159 MIR200A LINC01342 HES4 SAMD11 TTLL10-AS1 TTLL10 LOC100288175 MIR200B
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain LOC105378948 TNFRSF4 MIR6727 LOC100130417 DVL1 PLEKHN1 ACAP3 ISG15 SDF4 PERM1 MIR6808 UBE2J2 LOC284600 MIR6726 MIR200A FAM132A HES4 LOC107985728 SAMD11 TTLL10-AS1 TTLL10 LOC100288175 MIR200B TAS1R3 CCNL2 MXRA8 KLHL17 B3GALT6 CPTP MRPL20 RNF223 PUSL1 SCNN1D MIR429 AGRN TNFRSF18 ANKRD65 NOC2L LOC148413 CPSF3L C1orf159 LINC01342 TMEM88B AURKAIP1

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Process(es)


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