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See other RNF223 CNV Assays ›
Gene Symbol
RNF223
Assay Reference Genome
Location

Chr.1:1067641 on build GRCh38
Cytoband
1p36.33
Assay ID Hs04213079_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 401934

Gene Name:

 ring finger protein 223

Gene Aliases:

 -

Location:

 Chr.1:1065635-1074307 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
RNF223 XM_017001286.1 XP_016856775.1
XM_017001287.1 XP_016856776.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv945741 Chr.1:1007194 - 1092619 on Build GRCh38 Duplication RNF223 ISG15 C1orf159 LOC100288175 LOC105378948 AGRN
nsv509146 Chr.1:1010510 - 1111188 on Build GRCh38 Insertion RNF223 ISG15 C1orf159 LOC100288175 LOC105378948 AGRN
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain RNF223 ISG15 HES4 SAMD11 AGRN C1orf159 LOC100130417 PLEKHN1 LOC284600 LOC100288175 KLHL17 PERM1 LOC105378948 NOC2L LOC107985728
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss CPSF3L SAMD11 LOC148413 LOC101928626 AGRN SCNN1D FNDC10 LOC100288175 GABRD MIR6723 FAM87B MIB2 CFAP74 LOC102724312 C1orf159 LOC105378947 PLEKHN1 LOC284600 OR4F5 LOC100132287 LOC107985728 MIR1302-2 HES4 LINC00115 SLC35E2B MTND2P28 MIR200B TMEM240 MMP23A MRPL20 CPTP AURKAIP1 LOC105378591 SKI CCNL2 DVL1 MMP23B MIR200A TMEM88B LINC01342 LOC105378589 CDK11A LOC105378949 TMEM52 TTLL10-AS1 GNB1 ATAD3B NADK MORN1 MTND1P23 LOC105378592 NOC2L TTLL10 RNF223 ISG15 DDX11L1 MXRA8 LOC102725121 TNFRSF18 LOC107984841 B3GALT6 MIR6859-1 LOC100130417 ATAD3C CALML6 OR4F16 PERM1 ATAD3A UBE2J2 SSU72 WASH7P MIR429 MIR6726 FAM41C LOC107985729 TNFRSF4 FAAP20 ANKRD65 LOC100134822 KLHL17 MIR6859-2 LOC105378948 LOC729737 LOC100287934 LOC100506504 FAM132A CDK11B TAS1R3 PRKCZ SDF4 LOC100129534 OR4F29 PUSL1 FAM138A SLC35E2 LOC100133331 MIR6808 LINC01128 VWA1 MIR6727 ACAP3 LOC100288069
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion RNF223 ISG15 HES4 SAMD11 AGRN C1orf159 LOC100130417 PLEKHN1 LOC284600 LOC100288175 KLHL17 PERM1 LOC105378948 NOC2L LOC107985728
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain RNF223 ISG15 HES4 TNFRSF18 SAMD11 MIR200B AGRN LOC100130417 LOC100288175 PERM1 MIR200A MIR429 FAM41C TNFRSF4 SDF4 LINC01342 C1orf159 TTLL10-AS1 PLEKHN1 LOC284600 KLHL17 LOC105378948 NOC2L TTLL10 LOC107985728
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication RNF223 CPSF3L TNFRSF18 MIR200B AGRN B3GALT6 FAM132A SCNN1D CPTP LOC100288175 UBE2J2 TAS1R3 MIR200A MIR429 MIR6726 TNFRSF4 SDF4 LINC01342 PUSL1 C1orf159 TTLL10-AS1 MIR6727 ACAP3 LOC105378948 TTLL10
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain RNF223 ISG15 LOC100287934 HES4 LINC00115 SAMD11 LOC107984841 MTND2P28 LOC101928626 AGRN LOC100130417 LOC100288175 OR4F16 PERM1 MIR6723 FAM41C FAM87B LOC100133331 C1orf159 LINC01128 LOC105378947 PLEKHN1 LOC284600 LOC100288069 KLHL17 MTND1P23 LOC105378948 NOC2L LOC107985728
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss RNF223 ISG15 CPSF3L MXRA8 TNFRSF18 SAMD11 LOC148413 AGRN B3GALT6 SCNN1D LOC100130417 ATAD3C FNDC10 LOC100288175 PERM1 ATAD3A UBE2J2 SSU72 MIR429 MIR6726 FAM41C LOC107985729 TNFRSF4 FAM87B MIB2 ANKRD65 LOC102724312 C1orf159 PLEKHN1 LOC284600 KLHL17 LOC105378948 LOC107985728 LOC100287934 HES4 LINC00115 SLC35E2B MIR200B TMEM240 MMP23A FAM132A MRPL20 CPTP AURKAIP1 CCNL2 DVL1 CDK11B TAS1R3 MMP23B MIR200A TMEM88B SDF4 LINC01342 PUSL1 CDK11A SLC35E2 MIR6808 LINC01128 VWA1 TTLL10-AS1 MIR6727 ATAD3B ACAP3 NADK LOC100288069 NOC2L TTLL10
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss RNF223 ISG15 HES4 TNFRSF18 LINC00115 SAMD11 MIR200B AGRN B3GALT6 FAM132A LOC100130417 LOC100288175 PERM1 UBE2J2 MIR200A MIR429 FAM41C TNFRSF4 SDF4 FAM87B LINC01342 C1orf159 LINC01128 TTLL10-AS1 PLEKHN1 LOC284600 KLHL17 LOC105378948 NOC2L TTLL10 LOC107985728
nsv1013524 Chr.1:939510 - 1161955 on Build GRCh38 Gain RNF223 ISG15 HES4 SAMD11 LINC01342 AGRN C1orf159 PLEKHN1 LOC100288175 KLHL17 PERM1 LOC105378948 NOC2L
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain RNF223 ISG15 CPSF3L HES4 MXRA8 TNFRSF18 SAMD11 LOC148413 MIR200B AGRN B3GALT6 FAM132A SCNN1D MRPL20 CPTP LOC100130417 AURKAIP1 LOC100288175 CCNL2 PERM1 DVL1 UBE2J2 TAS1R3 MIR200A MIR429 MIR6726 TMEM88B TNFRSF4 SDF4 LINC01342 PUSL1 ANKRD65 MIR6808 C1orf159 TTLL10-AS1 MIR6727 PLEKHN1 LOC284600 ACAP3 KLHL17 LOC105378948 NOC2L TTLL10 LOC107985728
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion RNF223 ISG15 MIR200A MIR429 HES4 TNFRSF4 SDF4 TNFRSF18 SAMD11 LINC01342 MIR200B AGRN C1orf159 TTLL10-AS1 PLEKHN1 LOC100288175 KLHL17 PERM1 LOC105378948 NOC2L TTLL10

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Process(es)


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