Hs04276079_cn

• Gene Symbol: GYPB
• Assay Reference Genome Location: Chr.4:144006601 on build GRCh38
• Cytoband: 4q31.21

Target Gene Details

• Entrez Gene ID: 2994
• Gene Name: glycophorin B (MNS blood group)
• Gene Aliases: CD235b, GPB, GYP, MNS, PAS-3, SS
• Location: Chr.4:143995172-144021860 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GYPB	NM_001304382.1			NP_001291311.1
	NM_002100.5			NP_002091.3
	XM_011531903.2			XP_011530205.1
	XM_011531904.2			XP_011530206.1
	XM_011531905.2			XP_011530207.1
	XM_017008137.1			XP_016863626.1
	AY509882.1			AAR97607.1
	AY509883.1			AAR97608.1
	AY950609.1			AAX53130.1
	AY950610.1			AAX53131.1
	AY950611.1			AAX53132.1
	AY950612.1			AAX53133.1
	BC069310.1			AAH69310.1
	BC121077.1
	BC121078.1
	EU338223.1
	EU338224.1
	EU338225.1
	EU338226.1
	EU338227.1
	EU338228.1
	EU338229.1
	EU338230.1
	EU338235.1
	EU338236.1
	EU338237.1
	EU338238.1
	J02982.1			AAA52573.1
	U05255.1			AAA19251.1
	X08055.1			CAB42645.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv2914n106	Chr.4:144004647 - 144006847 on Build GRCh38	Duplication	GYPB
dgv5430n100	Chr.4:143999095 - 144144371 on Build GRCh38	Gain	GYPA GYPB
dgv5423n100	Chr.4:143899563 - 144038174 on Build GRCh38	Loss	GYPE GYPB LOC101927636
nsv437438	Chr.4:143993740 - 144017577 on Build GRCh38	Loss	GYPB
nsv1024138	Chr.4:143955508 - 144080924 on Build GRCh38	Loss	GYPB LOC101927636
dgv127e203	Chr.4:143794196 - 144129470 on Build GRCh38	Gain+Loss	GYPA GYPE GYPB LOC101927636 LOC105377458
nsv1023589	Chr.4:144005942 - 144038174 on Build GRCh38	Gain	GYPB
dgv5420n100	Chr.4:143882205 - 144124407 on Build GRCh38	Loss	GYPA GYPE GYPB LOC101927636
nsv436881	Chr.4:143970054 - 144065491 on Build GRCh38	Insertion	GYPB LOC101927636
nsv436452	Chr.4:143799752 - 144039632 on Build GRCh38	Deletion	GYPE GYPB LOC101927636 LOC105377458
dgv5421n100	Chr.4:143889299 - 144129458 on Build GRCh38	Gain	GYPA GYPE GYPB LOC101927636
dgv978e199	Chr.4:143790709 - 144083480 on Build GRCh38	Deletion	GYPE GYPB LOC101927636 LOC105377458
nsv595609	Chr.4:143947855 - 144009062 on Build GRCh38	Loss	GYPB LOC101927636
dgv5426n100	Chr.4:143965588 - 144062086 on Build GRCh38	Gain	GYPB LOC101927636
esv2752026	Chr.4:143800242 - 144202456 on Build GRCh38	Gain	GYPA GYPE GYPB LOC101927636 LOC105377458
esv2752030	Chr.4:143867490 - 144038242 on Build GRCh38	Gain	GYPE GYPB LOC101927636
nsv428452	Chr.4:143677706 - 144210439 on Build GRCh38	Loss	GYPA GYPE GYPB LOC101927636 FREM3 LOC105377458
dgv5429n100	Chr.4:143988099 - 144038174 on Build GRCh38	Loss	GYPB
nsv10584	Chr.4:143836418 - 144124500 on Build GRCh38	Gain+Loss	GYPA GYPE GYPB LOC101927636
esv3602521	Chr.4:143912755 - 144019313 on Build GRCh38	Loss	GYPB LOC101927636
nsv469732	Chr.4:143957112 - 144138551 on Build GRCh38	Gain	GYPA GYPB LOC101927636
esv2728481	Chr.4:143978248 - 144119589 on Build GRCh38	Deletion	GYPA GYPB LOC101927636
esv2662558	Chr.4:143976398 - 144079596 on Build GRCh38	Deletion	GYPB LOC101927636
esv3602528	Chr.4:144000788 - 144096746 on Build GRCh38	Loss	GYPB
nsv822759	Chr.4:143997352 - 144118226 on Build GRCh38	Gain	GYPA GYPB
dgv5431n100	Chr.4:144002985 - 144111731 on Build GRCh38	Gain+Loss	GYPA GYPB
nsv1126044	Chr.4:143973185 - 144076332 on Build GRCh38	Deletion	GYPB LOC101927636
nsv435807	Chr.4:143972057 - 144071239 on Build GRCh38	Deletion	GYPB LOC101927636
dgv5428n100	Chr.4:143979424 - 144098631 on Build GRCh38	Loss	GYPB LOC101927636
nsv436078	Chr.4:143825757 - 144052135 on Build GRCh38	Insertion	GYPE GYPB LOC101927636 LOC105377458
esv29621	Chr.4:143991482 - 144098041 on Build GRCh38	Gain+Loss	GYPB
esv3894047	Chr.4:143572032 - 144009062 on Build GRCh38	Gain	GYPE GYPB LOC101927636 FREM3 LOC105377458
esv34834	Chr.4:143999679 - 144110688 on Build GRCh38	Gain	GYPA GYPB
nsv967799	Chr.4:143913118 - 144101156 on Build GRCh38	Duplication	GYPB LOC101927636
dgv189e55	Chr.4:143800507 - 144110688 on Build GRCh38	Gain	GYPA GYPE GYPB LOC101927636 LOC105377458
nsv1030924	Chr.4:143999409 - 144022444 on Build GRCh38	Loss	GYPB
dgv5417n100	Chr.4:143857751 - 144080924 on Build GRCh38	Gain	GYPE GYPB LOC101927636
dgv5416n100	Chr.4:143824849 - 144031375 on Build GRCh38	Loss	GYPE GYPB LOC101927636 LOC105377458
nsv461664	Chr.4:143832994 - 144077967 on Build GRCh38	Gain	GYPE GYPB LOC101927636
esv2421355	Chr.4:143920939 - 144029040 on Build GRCh38	Deletion	GYPB LOC101927636
nsv1019176	Chr.4:143995988 - 144065698 on Build GRCh38	Loss	GYPB
esv3894042	Chr.4:143988650 - 144145332 on Build GRCh38	Gain	GYPA GYPB
nsv514257	Chr.4:144000341 - 144119733 on Build GRCh38	Gain	GYPA GYPB
nsv818282	Chr.4:144000454 - 144112657 on Build GRCh38	Gain	GYPA GYPB
nsv1022823	Chr.4:143981173 - 144021781 on Build GRCh38	Loss	GYPB LOC101927636
nsv517006	Chr.4:143823646 - 144135334 on Build GRCh38	Gain+Loss	GYPA GYPE GYPB LOC101927636 LOC105377458
esv2728476	Chr.4:143745831 - 144154189 on Build GRCh38	Deletion	GYPA GYPE GYPB LOC101927636 LOC105377458
nsv1020719	Chr.4:143821679 - 144111731 on Build GRCh38	Gain	GYPA GYPE GYPB LOC101927636 LOC105377458
nsv436411	Chr.4:143881539 - 144122272 on Build GRCh38	Deletion	GYPA GYPE GYPB LOC101927636
dgv9297n54	Chr.4:143973107 - 144135334 on Build GRCh38	Gain	GYPA GYPB LOC101927636
esv2759288	Chr.4:143427140 - 144210439 on Build GRCh38	Gain+Loss	GUSBP5 GYPA GYPE GYPB SMARCA5-AS1 LOC101927636 SMARCA5 GAB1 FREM3 LOC105377458
esv3602516	Chr.4:143826948 - 144057673 on Build GRCh38	Loss	GYPE GYPB LOC101927636 LOC105377458
esv2728480	Chr.4:143884064 - 144134952 on Build GRCh38	Deletion	GYPA GYPE GYPB LOC101927636
esv3894048	Chr.4:143908753 - 144145332 on Build GRCh38	Gain	GYPA GYPE GYPB LOC101927636

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Function(s)

protein binding