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See other OCLN CNV Assays ›
Gene Symbol
OCLN
Assay Reference Genome
Location

Chr.5:69494927 on build GRCh38
Cytoband
5q13.2
Assay ID Hs04305466_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 100506658

Gene Name:

 occludin

Gene Aliases:

 BLCPMG, PPP1R115

Location:

 Chr.5:69492292-69558104 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
OCLN NM_001205254.1 NP_001192183.1
NM_002538.3 NP_002529.1
XM_017008913.1 XP_016864402.1
XM_017008914.1 XP_016864403.1
AK290697.1
AK313501.1
BC029886.1 AAH29886.1
DB226845.1
U49184.1 AAC50451.1
U53823.1 AAB00195.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3570182 Chr.5:69457781 - 69533508 on Build GRCh38 Loss OCLN LOC101928924
nsv1034024 Chr.5:69464444 - 69822296 on Build GRCh38 Gain LOC728488 GTF2H2C OCLN LOC101928924 GUSBP3
nsv821643 Chr.5:69272838 - 71076658 on Build GRCh38 Loss SERF1A SMA5 SMN1 LOC728526 LOC647859 SERF1B CDK7 LOC101928924 GTF2H2B LOC441081 SMA4 LOC653080 LOC107986354 MARVELD2 GTF2H2 LOC728488 GTF2H2C RAD17 SMN2 OCLN CCDC125 LOC107986351 TAF9 AK6 NAIP LOC101929599 GUSBP3
nsv1023116 Chr.5:69448480 - 69571455 on Build GRCh38 Gain GTF2H2C OCLN LOC101928924
nsv428117 Chr.5:69347454 - 71500057 on Build GRCh38 Gain+Loss SERF1A SMA5 GUSBP9 SMN1 LOC728526 LOC647859 SERF1B LOC107986352 LOC101928924 LOC102724392 GTF2H2B LOC441081 SMA4 LOC653080 LOC107986354 MARVELD2 PMCHL2 GTF2H2 LOC728488 GTF2H2C RAD17 SMN2 LOC107986353 OCLN LOC107986351 TAF9 BDP1 AK6 NAIP LOC101929599 GUSBP3

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