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See other LPAL2 CNV Assays ›
Gene Symbol
LPAL2
Assay Reference Genome
Location

Chr.6:160501849 on build GRCh38
Cytoband
6q25.3
Assay ID Hs04307693_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 80350

Gene Name:

 lipoprotein(a) like 2, pseudogene

Gene Aliases:

 APOA2, APOAL, APOARGC, apo(a)rg-C

Location:

 Chr.6:160466555-160511124 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LPAL2 NR_028092.1
NR_028093.1
U19517.1 AAA85692.1
U19518.1 AAA85693.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3611438 Chr.6:160487993 - 160503876 on Build GRCh38 Gain LPAL2
nsv5566 Chr.6:160484923 - 160518346 on Build GRCh38 Insertion LPAL2
esv35098 Chr.6:160001557 - 160649838 on Build GRCh38 Gain LOC729603 SLC22A1 LPA IGF2R AIRN LPAL2 SLC22A2 SLC22A3
nsv818463 Chr.6:160014537 - 160604515 on Build GRCh38 Gain LOC729603 SLC22A1 LPA IGF2R LPAL2 SLC22A2 SLC22A3
esv6519 Chr.6:160456601 - 160535561 on Build GRCh38 Loss LPA LPAL2
nsv970186 Chr.6:160497203 - 160511769 on Build GRCh38 Duplication LPAL2
esv3611436 Chr.6:160456712 - 160535559 on Build GRCh38 Gain LPA LPAL2
esv2733055 Chr.6:160457077 - 160668796 on Build GRCh38 Deletion LPA LPAL2
nsv1026543 Chr.6:160306836 - 161585804 on Build GRCh38 Gain AGPAT4 LPA AGPAT4-IT1 PLG MAP3K4 LPAL2 PARK2 SLC22A3 LOC105378098
esv2759484 Chr.6:159951212 - 160813633 on Build GRCh38 Gain+Loss LOC729603 SLC22A1 LPA PLG IGF2R AIRN LPAL2 SLC22A2 SLC22A3
nsv525990 Chr.6:160482590 - 160549931 on Build GRCh38 Loss LPA LPAL2

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More Information


Additional Information:

For this assay, SNP(s) [rs113715756,rs117733303] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

serine protease

Gene Ontology Categories:

Function(s) Process(es)


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