Hs04331601_cn

• Gene Symbol: ZNHIT1
• Assay Reference Genome Location: Chr.7:101222811 on build GRCh38
• Cytoband: 7q22.1

Target Gene Details

• Entrez Gene ID: 10467
• Gene Name: zinc finger HIT-type containing 1
• Gene Aliases: CG1I, ZNFN4A1
• Location: Chr.7:101217704-101224191 on Build GRCh38
• Assay Gene Location: Overlaps Exon 3 - Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ZNHIT1	NM_006349.2			NP_006340.1
	XM_011515739.2			XP_011514041.1
	AF093571.1			AAF03558.1
	AK092478.1
	AK125123.1
	AK312136.1
	BC017333.2			AAH17333.1
	CR456992.1			CAG33273.1
	U61837.1			AAB88578.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3614321	Chr.7:101210074 - 101222993 on Build GRCh38	Gain	ZNHIT1 PLOD3
dgv11534n54	Chr.7:101160859 - 101238359 on Build GRCh38	Loss	ZNHIT1 AP1S1 MOGAT3 NAT16 PLOD3 VGF CLDN15
nsv607973	Chr.7:101139179 - 101230554 on Build GRCh38	Loss	ZNHIT1 AP1S1 MIR4653 MOGAT3 NAT16 SERPINE1 PLOD3 VGF
nsv1018841	Chr.7:101117129 - 101225018 on Build GRCh38	Gain	ZNHIT1 AP1S1 MIR4653 MOGAT3 NAT16 SERPINE1 PLOD3 VGF
esv2422376	Chr.7:101100204 - 101373190 on Build GRCh38	Duplication	ZNHIT1 LOC101927721 AP1S1 MIR4653 NAT16 IFT22 PLOD3 CLDN15 FIS1 MOGAT3 LOC101927746 COL26A1 SERPINE1 VGF
esv2422326	Chr.7:101190168 - 101356850 on Build GRCh38	Duplication	FIS1 ZNHIT1 LOC101927721 MOGAT3 LOC101927746 IFT22 PLOD3 CLDN15
nsv1030604	Chr.7:101074451 - 101580185 on Build GRCh38	Gain	ZNHIT1 LOC101927721 TRIM56 AP1S1 MIR4653 NAT16 IFT22 PLOD3 CLDN15 FIS1 MOGAT3 LOC101927746 COL26A1 SERPINE1 LINC01007 VGF
nsv607978	Chr.7:101217932 - 101328323 on Build GRCh38	Loss	FIS1 ZNHIT1 LOC101927721 LOC101927746 IFT22 CLDN15
esv2752134	Chr.7:101156850 - 101498586 on Build GRCh38	Gain	ZNHIT1 LOC101927721 AP1S1 MIR4653 NAT16 IFT22 PLOD3 CLDN15 FIS1 MOGAT3 LOC101927746 COL26A1 VGF
esv2734888	Chr.7:99975623 - 101290285 on Build GRCh38	Deletion	TAF6 C7orf43 GATS AP1S1 PVRIG GIGYF1 CLDN15 STAG3L5P-PVRIG2P-PILRB SLC12A9 MOGAT3 MEPCE ZCWPW1 AZGP1 TRIP6 AGFG2 PILRB COPS6 MBLAC1 AP4M1 CNPY4 MOSPD3 LOC105375429 GAL3ST4 PCOLCE MIR6875 VGF LOC102724094 ZASP MUC17 GPC2 POP7 MIR4653 MIR93 AZGP1P1 NAT16 EPHB4 PPP1R35 TFR2 MIR4658 STAG3 FIS1 FBXO24 TSC22D4 ZAN PMS2P1 SRRT SERPINE1 MIR6840 MUC3A NYAP1 SAP25 ZNHIT1 TRIM56 PILRA ZNF3 PVRIG2P ZSCAN21 MUC12 PLOD3 C7orf61 LRCH4 ACHE STAG3L5P ZKSCAN1 MCM7 EPO PCOLCE-AS1 SPDYE3 MIR106B MIR25 ACTL6B UFSP1 LAMTOR4 GNB2
nsv831075	Chr.7:101049016 - 101273737 on Build GRCh38	Loss	FIS1 ZNHIT1 TRIM56 AP1S1 MIR4653 MOGAT3 NAT16 SERPINE1 PLOD3 VGF MUC17 CLDN15
nsv607974	Chr.7:101149529 - 101328323 on Build GRCh38	Loss	FIS1 ZNHIT1 LOC101927721 AP1S1 MIR4653 MOGAT3 LOC101927746 NAT16 IFT22 PLOD3 VGF CLDN15
esv3614319	Chr.7:101206795 - 101265542 on Build GRCh38	Gain	FIS1 ZNHIT1 PLOD3 CLDN15
nsv831076	Chr.7:101185566 - 101368393 on Build GRCh38	Loss	FIS1 ZNHIT1 LOC101927721 MOGAT3 LOC101927746 COL26A1 IFT22 PLOD3 CLDN15

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

chromatin/chromatin-binding, or -regulatory protein

Gene Ontology Categories:

Process(es)

regulation of histone deacetylation
histone exchange

Function(s)

protein binding
nucleosome binding
histone deacetylase binding
metal ion binding