Hs04366837_cn

• Gene Symbol: RABL6
• Assay Reference Genome Location: Chr.9:136814078 on build GRCh38
• Cytoband: 9q34.3

Target Gene Details

• Entrez Gene ID: 55684
• Gene Name: RAB, member RAS oncogene family-like 6
• Gene Aliases: C9orf86, PARF, RBEL1, pp8875
• Location: Chr.9:136807922-136841187 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
RABL6	NM_001173988.1			NP_001167459.1
	NM_001173989.2			NP_001167460.1
	NM_024718.4			NP_078994.3
	AK307431.1
	BC002945.2			AAH02945.2
	BC021095.1			AAH21095.2
	BC035786.1			AAH35786.1
	CR989427.1
	CX784448.1
	DQ141240.1			AAZ73768.1
	EF156752.1
	EF156753.1
	GQ169126.1
	GQ169127.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2739396	Chr.9:136809577 - 136818862 on Build GRCh38	Deletion	RABL6
dgv1246n67	Chr.9:136806360 - 136823613 on Build GRCh38	Gain	CCDC183-AS1 RABL6 CCDC183
nsv818738	Chr.9:136740043 - 137009585 on Build GRCh38	Gain	LCNL1 MIR4292 PTGDS FBXW5 C9orf172 CLIC3 LCN15 TMEM141 LCN8 EDF1 RABL6 CCDC183 MIR6722 LCN10 C8G MAMDC4 C9orf142 PHPT1 PRR31 CCDC183-AS1 TRAF2 LOC100128593 LCN12 ABCA2 MIR4479 LCN6
esv29973	Chr.9:136795692 - 136859658 on Build GRCh38	Loss	MAMDC4 PHPT1 CCDC183-AS1 MIR4292 RABL6 CCDC183 C9orf172
nsv469918	Chr.9:136359865 - 137173890 on Build GRCh38	Loss	LCNL1 MIR4292 GRIN1 DNLZ C9orf172 HSPC324 SNORA17A NALT1 CLIC3 LCN15 TMEM141 EDF1 INPP5E RABL6 EGFL7 C9orf139 CCDC183 SDCCAG3 DPP7 NOTCH1 MIR6722 SAPCD2 AGPAT2 C9orf142 CCDC183-AS1 TRAF2 SNAPC4 MAN1B1 LCN12 ABCA2 LINC01451 FAM69B PTGDS CARD9 FBXW5 UAP1L1 SEC16A PMPCA SNORA17B MIR126 MIR4673 LCN8 FUT7 ENTPD2 NPDC1 C9orf163 MIR3621 LOC101930307 LCN10 C8G MAN1B1-AS1 MIR4674 TMEM210 MAMDC4 PHPT1 PRR31 LRRC26 LOC100128593 MIR4479 LCN6 SNHG7
esv2759720	Chr.9:136356377 - 136932033 on Build GRCh38	Loss	GPSM1 FAM69B MIR4292 CARD9 SEC16A DNLZ C9orf172 PMPCA HSPC324 SNORA17B SNORA17A NALT1 MIR126 LCN15 MIR4673 TMEM141 LCN8 EDF1 INPP5E RABL6 EGFL7 CCDC183 SDCCAG3 C9orf163 NOTCH1 MIR6722 LCN10 MIR4674 AGPAT2 MAMDC4 PHPT1 CCDC183-AS1 TRAF2 SNAPC4 LOC100128593 MIR4479 LINC01451 LCN6 SNHG7
esv3622016	Chr.9:136812973 - 136816971 on Build GRCh38	Loss	RABL6
nsv416072	Chr.9:136811674 - 136816745 on Build GRCh38	Deletion	RABL6
esv2422220	Chr.9:136584135 - 137350098 on Build GRCh38	Deletion	LCNL1 MIR4292 NRARP GRIN1 C9orf172 TPRN HSPC324 SNORA17A CLIC3 LCN15 TMEM141 EDF1 RABL6 EGFL7 C9orf139 CCDC183 RNF208 STPG3 FAM166A DPP7 RNF224 MIR6722 ANAPC2 SAPCD2 TOR4A AGPAT2 C9orf142 CCDC183-AS1 TRAF2 MAN1B1 LCN12 ABCA2 LINC01451 FAM69B PTGDS FBXW5 UAP1L1 SSNA1 TMEM203 TUBB4B SNORA17B MIR126 LCN8 FUT7 ENTPD2 SLC34A3 EXD3 CYSRT1 NELFB NPDC1 NDOR1 MIR3621 C9orf173-AS1 LOC101930307 LCN10 C8G MAN1B1-AS1 TMEM210 MAMDC4 PHPT1 PRR31 LRRC26 LOC100128593 MIR4479 LCN6 SNHG7

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

small GTPase

Gene Ontology Categories:

Process(es)

small GTPase mediated signal transduction

Function(s)

protein binding
GTP binding