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See other LSP1 CNV Assays ›
Gene Symbol
LSP1
Assay Reference Genome
Location

Chr.11:1870731 on build GRCh38
Cytoband
11p15.5
Assay ID Hs04397545_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 4046

Gene Name:

 lymphocyte-specific protein 1

Gene Aliases:

 WP34, pp52

Location:

 Chr.11:1852970-1892263 on Build GRCh38

Assay Gene Location:

 Within Intron 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LSP1 NM_001013253.1 NP_001013271.1
NM_001242932.1 NP_001229861.1
NM_001289005.1 NP_001275934.1
NM_002339.2 NP_002330.1
AK056576.1 1 488
AK092071.1
AK222733.1 BAD96453.1
AK290279.1
AK292033.1
BC001785.1 AAH01785.1
CR541728.1 CAG46529.1
CR541754.1 CAG46554.1
S67783.1 AAB29545.1
X55188.1 CAA38971.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv951282 Chr.11:1862771 - 1894970 on Build GRCh38 Deletion MIR7847 LSP1
nsv1159792 Chr.11:1844881 - 1887776 on Build GRCh38 Deletion MIR4298 MIR7847 LSP1
nsv522320 Chr.11:1835882 - 1996938 on Build GRCh38 Loss MRPL23-AS1 MIR7847 HOTS MIR675 TNNI2 SNORD131 LSP1 TNNT3 MIR4298 H19 LINC01219 LINC01150 MRPL23 SYT8
nsv1047474 Chr.11:1803515 - 2043381 on Build GRCh38 Gain MRPL23-AS1 MIR7847 HOTS MIR675 TNNI2 SNORD131 LSP1 TNNT3 MIR4298 H19 LINC01219 LINC01150 MRPL23 SYT8
nsv467648 Chr.11:1853174 - 1891496 on Build GRCh38 Loss MIR4298 MIR7847 LSP1
nsv553058 Chr.11:1863112 - 1892147 on Build GRCh38 Loss MIR7847 LSP1
nsv553050 Chr.11:1813024 - 1884944 on Build GRCh38 Loss MIR4298 MIR7847 TNNI2 LSP1 SYT8
nsv7643 Chr.11:1867726 - 1927695 on Build GRCh38 Deletion LINC01150 MIR7847 LSP1 TNNT3
dgv1565n54 Chr.11:1844330 - 1891496 on Build GRCh38 Loss MIR4298 MIR7847 LSP1
nsv553053 Chr.11:1836040 - 1887776 on Build GRCh38 Loss MIR4298 MIR7847 TNNI2 LSP1 SYT8
esv29980 Chr.11:1820597 - 2097889 on Build GRCh38 Loss MRPL23-AS1 MIR7847 HOTS MIR675 TNNI2 SNORD131 LSP1 TNNT3 MIR4298 H19 LINC01219 LINC01150 MRPL23 SYT8
nsv553047 Chr.11:1733170 - 2418537 on Build GRCh38 Gain MRPL23-AS1 CD81-AS1 MIR483 MIR7847 HOTS TNNI2 SNORD131 LSP1 CTSD MIR4686 TNNT3 MIR4298 H19 ASCL2 LINC01219 TH MRPL23 C11orf21 IGF2 SYT8 IGF2-AS INS-IGF2 INS TRPM5 MIR675 CD81 TSSC4 TSPAN32 LINC01150 IFITM10

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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