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See other SPG7 CNV Assays ›
Gene Symbol
SPG7
Assay Reference Genome
Location

Chr.16:89508924 on build GRCh38
Cytoband
16q24.3
Assay ID Hs04453265_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 6687

Gene Name:

 SPG7, paraplegin matrix AAA peptidase subunit

Gene Aliases:

 CAR, CMAR, PGN, SPG5C

Location:

 Chr.16:89508379-89557768 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPG7 NM_003119.3 NP_003110.1
NM_199367.2 NP_955399.1
XM_005256321.4 XP_005256378.1
XM_006721264.3 XP_006721327.1
XM_017023597.1 XP_016879086.1
XM_017023598.1 XP_016879087.1
XM_017023599.1 XP_016879088.1
BC036104.1 AAH36104.1
BI827568.1
DA770435.1
DB482451.1
HY006239.1
Y16610.1 CAA76314.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3639584 Chr.16:89504768 - 89531669 on Build GRCh38 Loss SPG7
esv2758670 Chr.16:89376499 - 89585740 on Build GRCh38 Gain ANKRD11 SNORD68 SPG7 RPL13 CPNE7 LOC101927817
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss ANKRD11 ZNF778 MC1R SNORD68 DPEP1 LOC107984817 ZNF276 GAS8-AS1 LOC101927817 LOC105371414 URAHP VPS9D1 LOC100287036 TCF25 AFG3L1P TUBB3 CPNE7 SPATA33 VPS9D1-AS1 SPIRE2 FANCA CENPBD1 FAM157C DBNDD1 GAS8 CDK10 SPG7 DEF8 SPATA2L CHMP1A PRDM7 LOC105371419 TUBB8P7 RPL13
nsv471118 Chr.16:89446826 - 89600929 on Build GRCh38 Gain ANKRD11 SNORD68 SPG7 RPL13 CPNE7 LOC101927817
nsv1063483 Chr.16:89347250 - 89661187 on Build GRCh38 Gain ANKRD11 CHMP1A SNORD68 DPEP1 SPG7 RPL13 CPNE7 LOC101927817 SPATA33
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss LINC00304 MVD DPEP1 LOC101927793 CYBA CBFA2T3 ZNF276 IL17C GAS8-AS1 LOC105371414 SNAI3-AS1 URAHP LOC100287036 TCF25 LOC100289580 CPNE7 LOC400558 VPS9D1-AS1 SPIRE2 FANCA CENPBD1 FAM157C LOC105371409 CTU2 CDK10 APRT SPATA2L GALNS PRDM7 TUBB8P7 PABPN1L RPL13 ANKRD11 ZNF778 LOC339059 MC1R SNORD68 SNAI3 PIEZO1 LOC107984817 LOC101927817 MIR4722 VPS9D1 AFG3L1P TUBB3 CDH15 SPATA33 LOC107987238 DBNDD1 GAS8 RNF166 SPG7 DEF8 CDT1 LOC100129697 CHMP1A ACSF3 LOC105371419 TRAPPC2L SLC22A31

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