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See other SPG7 CNV Assays ›
Gene Symbol
SPG7
Assay Reference Genome
Location

Chr.16:89533717 on build GRCh38
Cytoband
16q24.3
Assay ID Hs04454440_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 6687

Gene Name:

 SPG7, paraplegin matrix AAA peptidase subunit

Gene Aliases:

 CAR, CMAR, PGN, SPG5C

Location:

 Chr.16:89508379-89557768 on Build GRCh38

Assay Gene Location:

 Within Intron 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPG7 NM_003119.3 NP_003110.1
NM_199367.2 NP_955399.1
XM_005256321.4 XP_005256378.1
XM_006721264.3 XP_006721327.1
XM_017023597.1 XP_016879086.1
XM_017023598.1 XP_016879087.1
XM_017023599.1 XP_016879088.1
BC035929.2 AAH35929.1
BC036104.1 AAH36104.1
Y16610.1 CAA76314.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2758670 Chr.16:89376499 - 89585740 on Build GRCh38 Gain SNORD68 SPG7 CPNE7 RPL13 ANKRD11 LOC101927817
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss FAM157C MC1R LOC100287036 SPATA2L SNORD68 SPATA33 DBNDD1 PRDM7 TUBB3 TCF25 DEF8 VPS9D1 URAHP CHMP1A VPS9D1-AS1 TUBB8P7 SPG7 CPNE7 DPEP1 SPIRE2 CENPBD1 ZNF276 LOC105371419 LOC105371414 FANCA GAS8-AS1 ZNF778 LOC101927817 CDK10 LOC107984817 GAS8 RPL13 AFG3L1P ANKRD11
esv3639587 Chr.16:89532694 - 89597465 on Build GRCh38 Loss SNORD68 SPG7 CPNE7 RPL13
nsv471118 Chr.16:89446826 - 89600929 on Build GRCh38 Gain SNORD68 SPG7 CPNE7 RPL13 ANKRD11 LOC101927817
nsv1063483 Chr.16:89347250 - 89661187 on Build GRCh38 Gain SNORD68 SPATA33 SPG7 CPNE7 RPL13 DPEP1 ANKRD11 CHMP1A LOC101927817
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss SLC22A31 CDH15 LOC100129697 CDT1 MC1R LOC105371409 GALNS CBFA2T3 DBNDD1 TUBB3 TCF25 URAHP LOC400558 VPS9D1-AS1 SPG7 DPEP1 SPIRE2 CENPBD1 LOC100289580 ZNF276 LOC105371414 LOC101927793 FANCA GAS8-AS1 CDK10 LOC107984817 CTU2 FAM157C LINC00304 RNF166 LOC100287036 SPATA2L SNORD68 SPATA33 IL17C PRDM7 DEF8 VPS9D1 MIR4722 LOC107987238 TRAPPC2L CHMP1A MVD TUBB8P7 SNAI3-AS1 PABPN1L CPNE7 SNAI3 LOC339059 ACSF3 LOC105371419 ZNF778 PIEZO1 APRT LOC101927817 CYBA GAS8 RPL13 AFG3L1P ANKRD11
nsv509639 Chr.16:89513538 - 89775915 on Build GRCh38 Insertion SPG7 CPNE7 DPEP1 ZNF276 SPATA2L FANCA CDK10 SNORD68 SPATA33 RPL13 VPS9D1 CHMP1A VPS9D1-AS1

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