Hs04456880_cn

• Gene Symbol: ERVK13-1
• Assay Reference Genome Location: Chr.16:2659904 on build GRCh38
• Cytoband: 16p13.3

Target Gene Details

• Entrez Gene ID: 100507321
• Gene Name: endogenous retrovirus group K13 member 1
• Gene Aliases: -
• Location: Chr.16:2658389-2673439 on Build GRCh38
• Assay Gene Location: Within Exon 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ERVK13-1	NR_040023.1	3	6821

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv977898	Chr.16:2657895 - 2671502 on Build GRCh38	Duplication	ERVK13-1
esv2422427	Chr.16:10001 - 2723164 on Build GRCh38	Duplication	LOC105371184 LOC105371049 FAHD1 TBC1D24 ARHGDIG MIR6859-4 NME4 MSRB1 LUC7L BAIAP3 TSR3 C16orf91 CCDC78 METTL26 TPSD1 PGP MIR3178 WASIR2 HBQ1 LMF1-AS1 KCTD5 RPUSD1 FLJ42627 WFIKKN1 SNHG9 JMJD8 UNKL PRSS29P C1QTNF8 MPG PRSS27 FBXL16 MRPL28 TRAF7 MIR4717 LOC106660606 HBM MIR6767 MIR6768 TSC2 DECR2 EME2 NTHL1 LINC00235 TMEM8A METRN TPSAB1 MCRIP2 MIR940 RPS2 CACNA1H HBA1 LOC101929280 PIGQ HBZ TPSG1 RNPS1 ABCA17P RHOT2 SPSB3 C16orf59 SNHG19 DDX11L10 NARFL CASKIN1 SYNGR3 ZNF598 PTX4 MIR4516 LMF1 UBE2I POLR3K NHLRC4 ERVK13-1 GFER LOC652276 MRPS34 SNORA64 SLC9A3R2 NPRL3 MIR3177 MIR3180-5 CRAMP1 NUBP2 IGFALS PRR35 LOC105371045 WDR90 LOC100287175 MIR1225 MSLN NOXO1 MEIOB LOC107984876 ATP6V0C MAPK8IP3 E4F1 LOC105371046 BRICD5 HAGHL RAB26 LOC100134368 LOC107987233 CEMP1 STUB1 ECI1 MIR6511B1 NME3 HAGH MIR5587 SSTR5-AS1 RNF151 LOC729652 SNORA10 LINC00254 AMDHD2 NDUFB10 RHBDF1 RAB11FIP3 PKD1 GNPTG CCNF LOC105371047 CLCN7 LOC105371038 TPSB2 IFT140 NPW PDIA2 FAM173A WDR24 HBA2 PRR25 SNRNP25 DNASE1L2 AXIN1 RPL23AP5 MIR662 FAM234A TMEM204 CAPN15 SNORA78 RPL3L RHBDL1 PDPK1 SNORD60 SSTR5 SOX8 HN1L RGS11 MIR3677 MIR3176 MLST8 NTN3 CHTF18 ABCA3 RAB40C TELO2 HS3ST6 CCDC154 GNG13 TBL3
esv3892757	Chr.16:2617854 - 2693417 on Build GRCh38	Gain	FLJ42627 ERVK13-1 LOC652276 KCTD5
esv3570075	Chr.16:2643453 - 2679764 on Build GRCh38	Gain	FLJ42627 ERVK13-1
esv3637635	Chr.16:2650514 - 2690486 on Build GRCh38	Gain	ERVK13-1 KCTD5
esv8446	Chr.16:2601455 - 2680177 on Build GRCh38	Loss	PDPK1 FLJ42627 ERVK13-1 LOC652276
esv29849	Chr.16:2599817 - 2686114 on Build GRCh38	Gain+Loss	PDPK1 FLJ42627 ERVK13-1 LOC652276 KCTD5
esv33514	Chr.16:2599043 - 2687260 on Build GRCh38	Gain+Loss	PDPK1 FLJ42627 ERVK13-1 LOC652276 KCTD5
esv3570154	Chr.16:2657536 - 2679764 on Build GRCh38	Gain	ERVK13-1
esv2760067	Chr.16:2486824 - 2820535 on Build GRCh38	Gain+Loss	PDPK1 PRSS33 FLJ42627 TBC1D24 CEMP1 SRRM2-AS1 TCEB2 PRSS41 PRSS27 PRSS21 AMDHD2 MIR3178 ATP6V0C ERVK13-1 SRRM2 LOC652276 KCTD5
nsv827518	Chr.16:2605571 - 2690118 on Build GRCh38	Gain	FLJ42627 ERVK13-1 LOC652276 KCTD5
dgv2693n100	Chr.16:2593295 - 2676863 on Build GRCh38	Gain	PDPK1 FLJ42627 ERVK13-1 LOC652276
nsv571244	Chr.16:2649303 - 2700695 on Build GRCh38	Gain	ERVK13-1 KCTD5
esv2762199	Chr.16:2629667 - 2679700 on Build GRCh38	Gain+Loss	FLJ42627 ERVK13-1 LOC652276
nsv1037150	Chr.16:2629655 - 2691811 on Build GRCh38	Gain	FLJ42627 ERVK13-1 LOC652276 KCTD5
nsv442390	Chr.16:2656794 - 2679700 on Build GRCh38	Gain	ERVK13-1
dgv4870n54	Chr.16:2648591 - 2663274 on Build GRCh38	Gain	ERVK13-1
nsv833122	Chr.16:2501717 - 2663937 on Build GRCh38	Loss	PDPK1 FLJ42627 TBC1D24 CEMP1 AMDHD2 MIR3178 ATP6V0C ERVK13-1 LOC652276
esv2750386	Chr.16:2601546 - 2680037 on Build GRCh38	Deletion	PDPK1 FLJ42627 ERVK13-1 LOC652276
nsv833123	Chr.16:2561247 - 2764988 on Build GRCh38	Gain+Loss	PDPK1 PRSS27 FLJ42627 SRRM2-AS1 ERVK13-1 SRRM2 LOC652276 KCTD5
dgv780e212	Chr.16:2595646 - 2700191 on Build GRCh38	Gain	PDPK1 FLJ42627 ERVK13-1 LOC652276 KCTD5

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Function(s)

structural molecule activity