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See other SPG7 CNV Assays ›
Gene Symbol
SPG7
Assay Reference Genome
Location

Chr.16:89512908 on build GRCh38
Cytoband
16q24.3
Assay ID Hs04461232_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 6687

Gene Name:

 SPG7, paraplegin matrix AAA peptidase subunit

Gene Aliases:

 CAR, CMAR, PGN, SPG5C

Location:

 Chr.16:89508379-89557768 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 2 - Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPG7 NM_003119.3 NP_003110.1
NM_199367.2 NP_955399.1
XM_005256321.4 XP_005256378.1
XM_006721264.3 XP_006721327.1
XM_017023597.1 XP_016879086.1
XM_017023598.1 XP_016879087.1
XM_017023599.1 XP_016879088.1
BC035929.2 AAH35929.1
BC036104.1 AAH36104.1
BI827568.1
HY006239.1
Y16610.1 CAA76314.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3639584 Chr.16:89504768 - 89531669 on Build GRCh38 Loss SPG7
esv2758670 Chr.16:89376499 - 89585740 on Build GRCh38 Gain SNORD68 ANKRD11 SPG7 LOC101927817 CPNE7 RPL13
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss TCF25 VPS9D1 ZNF276 DBNDD1 ANKRD11 LOC101927817 DEF8 CHMP1A MC1R CPNE7 SPATA33 DPEP1 LOC107984817 CENPBD1 URAHP TUBB8P7 LOC100287036 CDK10 FAM157C LOC105371419 TUBB3 SNORD68 PRDM7 GAS8 AFG3L1P GAS8-AS1 ZNF778 SPIRE2 FANCA SPG7 LOC105371414 RPL13 VPS9D1-AS1 SPATA2L
nsv471118 Chr.16:89446826 - 89600929 on Build GRCh38 Gain SNORD68 ANKRD11 SPG7 LOC101927817 CPNE7 RPL13
nsv1063483 Chr.16:89347250 - 89661187 on Build GRCh38 Gain SNORD68 ANKRD11 SPG7 LOC101927817 CHMP1A CPNE7 RPL13 SPATA33 DPEP1
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss TCF25 VPS9D1 ZNF276 LOC101927817 CTU2 MC1R CPNE7 SNAI3 CDH15 IL17C LOC100287036 CDK10 PRDM7 GAS8 CBFA2T3 LOC101927793 GALNS SNAI3-AS1 LOC100289580 CYBA SPIRE2 APRT SLC22A31 LOC105371414 RPL13 LOC105371409 SPATA2L RNF166 DBNDD1 ANKRD11 DEF8 CHMP1A PIEZO1 SPATA33 DPEP1 LOC400558 CDT1 TRAPPC2L LOC107984817 CENPBD1 URAHP TUBB8P7 ACSF3 FAM157C MIR4722 LOC105371419 TUBB3 SNORD68 AFG3L1P GAS8-AS1 LOC339059 ZNF778 LOC100129697 FANCA SPG7 MVD PABPN1L LINC00304 LOC107987238 VPS9D1-AS1

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