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See other ZNF43 CNV Assays ›
Gene Symbol
ZNF43
Assay Reference Genome
Location

Chr.19:21823355 on build GRCh38
Cytoband
19p12
Assay ID Hs04488626_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 7594

Gene Name:

 zinc finger protein 43

Gene Aliases:

 HTF6, KOX27, ZNF39L1

Location:

 Chr.19:21804946-21852095 on Build GRCh38

Assay Gene Location:

 Within Intron 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ZNF43 NM_001256648.1 NP_001243577.1
NM_001256649.1 NP_001243578.1
NM_001256650.1 NP_001243579.1
NM_001256651.1 NP_001243580.1
NM_001256653.1 NP_001243582.1
NM_001256654.1 NP_001243583.1
NM_003423.3 NP_003414.2
XM_011528257.2 XP_011526559.1
XM_017027207.1 XP_016882696.1
XM_017027208.1 XP_016882697.1
XM_017027209.1 XP_016882698.1
XM_017027210.1 XP_016882699.1
XM_017027211.1 XP_016882700.1
XM_017027212.1 XP_016882701.1
XM_017027213.1 XP_016882702.1
XM_017027214.1 XP_016882703.1
XM_017027215.1 XP_016882704.1
XM_017027216.1 XP_016882705.1
AK291353.1
BC006528.2 AAH06528.2
BX471947.1
CR933640.1 CAI45941.1
DA784080.1
DB158705.1
DB446440.1
DR002502.1
M61869.1 AAA58674.1
X59244.1 CAA41932.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2758750 Chr.19:21802686 - 23757665 on Build GRCh38 Gain+Loss ZNF681 LOC101929124 LINC01233 ZNF43 ZNF676 LOC101929164 ZNF728 LINC01224 ZNF99 ZNF492 ZNF675 ZNF724P ZNF91 LOC100996349 ZNF730 ZNF98 ZNF729 ZNF208 ZNF257 LOC374890 LOC101929144 GOLGA2P9 IPO5P1 LOC105376917
nsv961194 Chr.19:21815622 - 21837110 on Build GRCh38 Duplication ZNF43
nsv833784 Chr.19:21719845 - 21854351 on Build GRCh38 Loss ZNF43 LOC641367 ZNF100
nsv578969 Chr.19:21614141 - 21836895 on Build GRCh38 Loss ZNF43 LOC641367 ZNF100 LOC400682
nsv578971 Chr.19:21767535 - 21825427 on Build GRCh38 Loss ZNF43 ZNF100
nsv1061327 Chr.19:21059770 - 22484758 on Build GRCh38 Gain ZNF429 ZNF43 ZNF676 LOC101929007 ZNF714 LINC00664 LOC105372321 ZNF98 ZNF430 ZNF729 ZNF208 ZNF431 ZNF257 ZNF708 ZNF493 ZNF738 LOC641367 LOC105376917 ZNF100 LOC400682
nsv1063115 Chr.19:21599302 - 22345237 on Build GRCh38 Gain ZNF208 ZNF43 ZNF257 ZNF676 LOC641367 ZNF100 LOC400682 ZNF729
esv2718343 Chr.19:21616278 - 21851531 on Build GRCh38 Deletion ZNF43 LOC641367 ZNF100 LOC400682
dgv511e201 Chr.19:21567823 - 23250023 on Build GRCh38 Deletion LOC101929124 LINC01233 ZNF43 ZNF676 LOC101929164 LOC101929007 ZNF728 ZNF99 ZNF492 ZNF724P LOC100996349 ZNF730 ZNF98 ZNF729 ZNF208 ZNF257 LOC374890 LOC101929144 GOLGA2P9 LOC641367 LOC105376917 ZNF100 LOC400682
esv2718335 Chr.19:21518987 - 22435411 on Build GRCh38 Deletion ZNF208 ZNF429 ZNF43 ZNF257 ZNF676 LOC101929007 LOC641367 ZNF98 ZNF100 LOC400682 ZNF729

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More Information


Additional Information:

For this assay, SNP(s) [rs77751145] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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