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See other CPT1C CNV Assays ›
Gene Symbol
CPT1C
Assay Reference Genome
Location

Chr.19:49693274 on build GRCh38
Cytoband
19q13.33
Assay ID Hs04489896_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 126129

Gene Name:

 carnitine palmitoyltransferase 1C

Gene Aliases:

 CATL1, CPT1-B, CPT1P, CPTI-B, CPTIC, SPG73

Location:

 Chr.19:49690672-49713731 on Build GRCh38

Assay Gene Location:

 Within Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CPT1C NM_001136052.2 NP_001129524.1
NM_001199752.2 NP_001186681.1
NM_001199753.1 NP_001186682.1
NM_152359.2 NP_689572.1
NR_108072.1
XM_005258505.2 XP_005258562.1
XM_005258506.4 XP_005258563.1
XM_006723009.3 XP_006723072.1
XM_011526438.2 XP_011524740.1
XM_011526439.2 XP_011524741.1
XM_011526440.2 XP_011524742.1
XM_017026265.1 XP_016881754.1
XM_017026266.1 XP_016881755.1
XM_017026267.1 XP_016881756.1
XM_017026268.1 XP_016881757.1
XM_017026269.1 XP_016881758.1
XM_017026270.1 XP_016881759.1
XM_017026271.1 XP_016881760.1
XM_017026272.1 XP_016881761.1
XM_017026273.1 XP_016881762.1
AF357970.1 AAL99615.1
AK096516.1
AK289713.1
AK290092.1
AK299866.1
AK309087.1
BC029104.1 AAH29104.1
BP194020.1
DB456457.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss BCL2L12 ADM5 PRRG2 SCAF1 PRMT1 PRR12 NOSIP IRF3 CPT1C RRAS MIR5088
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss BCL2L12 ADM5 PRRG2 SCAF1 PRMT1 PRR12 NOSIP IRF3 CPT1C RRAS MIR5088
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss SNAR-C5 BCL2L12 LOC105372430 SNAR-C1 BSPH1 SNAR-A14 ADM5 IZUMO1 TRPM4 FGF21 MED25 GYS1 NUCB1-AS1 SNAR-A9 EMP3 SNAR-A1 IRF3 C19orf73 FTL LIN7B KCNJ14 FLJ26850 FAM83E SNORD35A CD37 SIGLEC16 KDELR1 PPFIA3 FUT1 CCDC155 SNAR-D HRC RPL13A CABP5 SNORD33 PLA2G4C DBP SNAR-A7 SNAR-A2 MIR4751 SYNGR4 SNAR-G1 SPACA4 SNAR-C4 PRRG2 CARD8-AS1 PTOV1-AS1 SNAR-A10 CGB5 MIR4750 SNAR-B2 LOC101928295 NTF4 PTOV1 CGB1 ZNF114 CGB2 CA11 ALDH16A1 TBC1D17 HSD17B14 SNAR-A11 SNRNP70 BCAT2 PTH2 SNORD32A RPL18 TSKS NOSIP CGB3 LOC105447645 AKT1S1 PLA2G4C-AS1 SNAR-A12 RASIP1 SNAR-C2 SNORD34 FLT3LG DKKL1 BAX SNAR-A8 DHDH CGB7 ATF5 PTOV1-AS2 RUVBL2 PRR12 RPS11 MIR4324 CGB8 SNAR-A3 MAMSTR SNAR-B1 LMTK3 CYTH2 MIR6800 TEAD2 GFY CARD8 IL4I1 PIH1D1 MIR5088 LHB GRWD1 SNAR-A5 AP2A1 SCAF1 SIGLEC11 ZNF473 LIG1 PLEKHA4 SNAR-G2 RCN3 TMEM143 SNAR-A13 PNKP NUCB1 PRMT1 SLC6A16 MIR6798 C19orf68 SULT2B1 NUP62 SNAR-C3 LOC101059948 MIR150 SEC1P FCGRT FUZ MIR4749 SNAR-A4 CCDC114 RRAS GRIN2D NTN5 SPHK2 TULP2 SNORD35B SLC17A7 SNAR-A6 KCNA7 VRK3 CPT1C FUT2 MIR6799 LOC100287477 PPP1R15A ELSPBP1
nsv817854 Chr.19:49618821 - 49726387 on Build GRCh38 Gain BCL2L12 ADM5 SCAF1 PRMT1 PRR12 IRF3 CPT1C RRAS MIR5088
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion BCL2L12 AP2A1 TSKS SCAF1 NOSIP AKT1S1 ADM5 PNKP PRMT1 MIR4751 NUP62 MED25 ATF5 PTOV1-AS2 PRRG2 FUZ MIR4749 PRR12 IRF3 PTOV1-AS1 RRAS MIR4750 PTOV1 MIR6800 CPT1C IL4I1 MIR6799 TBC1D17 MIR5088
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain BCL2L12 ADM5 PRRG2 SCAF1 PRMT1 PRR12 NOSIP IRF3 CPT1C RRAS MIR5088
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion BCL2L12 AP2A1 TSKS SCAF1 NOSIP RPL13A SNORD33 RCN3 ADM5 SNORD34 PRMT1 MED25 MIR150 PRRG2 FCGRT FUZ PRR12 RPS11 IRF3 PTOV1-AS1 RRAS SNORD35B MIR6800 CPT1C SNORD35A MIR6799 MIR5088 SNORD32A

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

acyltransferase

Gene Ontology Categories:

Function(s) Process(es)


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