Genomic Map
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Target Gene Details
Entrez Gene ID: | 24148 |
Gene Name: | pre-mRNA processing factor 6 |
Gene Aliases: |
ANT-1, ANT1, C20orf14, Prp6, RP60, SNRNP102, TOM, U5-102K, hPrp6 |
Location: |
Chr.20:63981069-64033100 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| PRPF6 | NM_012469.3 | NP_036601.2 | ||
| XM_006723769.2 | XP_006723832.1 | |||
| AB019219.1 | BAA37140.1 | |||
| AF026031.1 | AAD01798.1 | |||
| AF221842.1 | AAF66128.1 | |||
| AK001554.1 | ||||
| AK225993.1 | ||||
| AK314310.1 | ||||
| BC001666.2 | AAH01666.1 | |||
| BI562505.1 | ||||
| BP366197.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv586703 | Chr.20:63964886 - 64095388 on Build GRCh38 | Loss |
 SAMD10
LINC00176
TCEA2
PRPF6
MIR6813
OPRL1
ZNF512B
RGS19
LKAAEAR1
SOX18
|
| nsv428381 | Chr.20:63583375 - 64334167 on Build GRCh38 | Gain+Loss |
LINC00266-1
STMN3
PRPF6
GMEB2
MIR6813
RTEL1
RGS19
MYT1
LKAAEAR1
SOX18
ABHD16B
MIR1914
MIR941-5
UCKL1
ZGPAT
MIR941-4
LIME1
TPD52L2
ZNF512B
TNFRSF6B
DNAJC5
UCKL1-AS1
LINC00176
OPRL1
RTEL1-TNFRSF6B
MIR647
PCMTD2
C20orf181
LOC100505771
MIR941-3
ZBTB46
SAMD10
TCEA2
ARFRP1
NPBWR2
MIR941-1
SLC2A4RG
ZBTB46-AS1
MIR941-2
|
| nsv469773 | Chr.20:63845428 - 64039312 on Build GRCh38 | Gain |
UCKL1-AS1
LINC00176
PRPF6
MIR647
C20orf181
ABHD16B
MIR1914
MIR941-3
MIR941-5
SAMD10
MIR941-1
UCKL1
MIR941-4
TPD52L2
ZNF512B
MIR941-2
DNAJC5
|
| nsv1160691 | Chr.20:63943650 - 64055199 on Build GRCh38 | Deletion |
UCKL1-AS1
SAMD10
LINC00176
TCEA2
PRPF6
UCKL1
ZNF512B
SOX18
|
Back To TopMore Information
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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