Hs04496600_cn

• Gene Symbol: YTHDF1
• Assay Reference Genome Location: Chr.20:63207629 on build GRCh38
• Cytoband: 20q13.33

Target Gene Details

• Entrez Gene ID: 54915
• Gene Name: YTH N6-methyladenosine RNA binding protein 1
• Gene Aliases: C20orf21
• Location: Chr.20:63195429-63216186 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
YTHDF1	NM_017798.3			NP_060268.2
	AK095795.1
	AK300073.1
	BC003681.1			AAH03681.1
	BC050284.1			AAH50284.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv519n27	Chr.20:63154307 - 63248817 on Build GRCh38	Loss	BIRC7 YTHDF1 LOC107985425 MIR3196 NKAIN4 MIR124-3
nsv953306	Chr.20:63151949 - 63571247 on Build GRCh38	Deletion	BIRC7 YTHDF1 PPDPF MIR3196 EEF1A2 LOC102723788 HELZ2 MIR4326 SRMS PTK6 ARFGAP1 CHRNA4 LOC100130587 FNDC11 COL20A1 KCNQ2 LOC107985425 NKAIN4 MIR124-3 FLJ16779 LOC100130152
dgv68n68	Chr.20:63076461 - 63224595 on Build GRCh38	Loss	HAR1B YTHDF1 HAR1A MIR124-3 LOC63930
nsv586559	Chr.20:63195172 - 63248817 on Build GRCh38	Gain	BIRC7 YTHDF1 LOC107985425 MIR3196 NKAIN4
nsv9825	Chr.20:62775470 - 63601330 on Build GRCh38	Gain	HAR1B COL9A3 BIRC7 DIDO1 PPDPF GMEB2 HELZ2 LINC00659 MIR4326 LOC63930 OGFR PTK6 LOC107985428 FNDC11 COL20A1 KCNQ2 LOC107985425 GID8 MIR124-3 MRGBP LINC01056 FLJ16779 DPH3P1 YTHDF1 MIR3196 EEF1A2 LOC102723788 TCFL5 LINC00029 SRMS ARFGAP1 OGFR-AS1 BHLHE23 CHRNA4 LOC100130587 HAR1A SLC17A9 NKAIN4 LOC100130152
nsv834031	Chr.20:63132252 - 63245925 on Build GRCh38	Loss	BIRC7 YTHDF1 LOC107985425 MIR3196 NKAIN4 MIR124-3

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

positive regulation of translational initiation

Function(s)

ribosome binding
poly(A) RNA binding
N6-methyladenosine-containing RNA binding