Hs04544757_cn

• Gene Symbol: ST6GALNAC5
• Assay Reference Genome Location: Chr.1:76916302 on build GRCh38
• Cytoband: 1p31.1

Target Gene Details

• Entrez Gene ID: 81849
• Gene Name: ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
• Gene Aliases: SIAT7-E, SIAT7E, ST6GalNAcV
• Location: Chr.1:76867408-77069167 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ST6GALNAC5	NM_001320273.1			NP_001307202.1
	NM_001320274.1			NP_001307203.1
	NM_030965.2			NP_112227.1
	AJ507292.1			CAD45372.1
	AK056241.1			BAB71127.1
	AK095758.1
	AK295019.1
	AK300902.1
	BC001201.1			AAH01201.1
	DA166913.1
	DC358960.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1005649	Chr.1:76675354 - 76933062 on Build GRCh38	Loss	ST6GALNAC5
dgv200n100	Chr.1:76909851 - 76965054 on Build GRCh38	Gain	ST6GALNAC5

More Information

Additional Information:

For this assay, SNP(s) [rs116746050,rs75001327] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

ganglioside biosynthetic process
glycosphingolipid biosynthetic process
oligosaccharide metabolic process
oligosaccharide biosynthetic process
protein N-linked glycosylation via asparagine
sialylation

Function(s)

alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity
sialyltransferase activity