Hs04800957_cn

• Gene Symbol: CHRNA9
• Assay Reference Genome Location: Chr.4:40350439 on build GRCh38
• Cytoband: 4p14

Target Gene Details

• Entrez Gene ID: 55584
• Gene Name: cholinergic receptor nicotinic alpha 9 subunit
• Gene Aliases: HSA243342, NACHRA9
• Location: Chr.4:40335329-40355217 on Build GRCh38
• Assay Gene Location: Within Intron 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CHRNA9	NM_017581.3			NP_060051.2
	AF227732.1			AAF61920.1
	AJ243342.1			CAB65091.1
	BC113549.1
	BC113575.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3569393	Chr.4:40346277 - 40354016 on Build GRCh38	Loss	CHRNA9

More Information

Additional Information:

For this assay, SNP(s) [rs79572918] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

ligand-gated ion channel

Gene Ontology Categories:

Process(es)

signal transduction
positive regulation of cytosolic calcium ion concentration
synaptic transmission, cholinergic
inner ear morphogenesis
detection of mechanical stimulus involved in sensory perception of sound
calcium ion transmembrane transport

Function(s)

acetylcholine-activated cation-selective channel activity
calcium channel activity
ligand-gated ion channel activity
acetylcholine-gated cation channel activity
acetylcholine binding