Hs04920758_cn

• Gene Symbol: BTN3A1
• Assay Reference Genome Location: Chr.6:26411347 on build GRCh38
• Cytoband: 6p22.2

Target Gene Details

• Entrez Gene ID: 11119
• Gene Name: butyrophilin subfamily 3 member A1
• Gene Aliases: BT3.1, BTF5, BTN3.1, CD277
• Location: Chr.6:26402237-26415216 on Build GRCh38
• Assay Gene Location: Within Intron 8

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
BTN3A1	NM_001145008.1			NP_001138480.1
	NM_001145009.1			NP_001138481.1
	NM_007048.5			NP_008979.3
	NM_194441.2			NP_919423.1
	XM_005248833.2			XP_005248890.1
	XM_005248834.3			XP_005248891.1
	XM_006714983.2			XP_006715046.1
	AK223474.1			BAD97194.1
	AK290193.1
	AK291162.1
	AK295720.1
	AK298652.1
	AK299327.1
	AK311233.1
	BC118586.1
	BC121800.1
	BG744194.1
	CB148209.1
	U90552.2			AAB53430.1
	Y07827.1			CAA69164.1

Target Gene Details

• Entrez Gene ID: 11118
• Gene Name: butyrophilin subfamily 3 member A2
• Gene Aliases: BT3.2, BTF4, BTN3.2, CD277
• Location: Chr.6:26365159-26451697 on Build GRCh38
• Assay Gene Location: Within Intron 11

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
BTN3A2	XM_011514268.2			XP_011512570.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1023453	Chr.6:25853602 - 26528022 on Build GRCh38	Gain	HIST1H4B HIST1H3B BTN1A1 HIST1H2BC HIST1H4E HIST1H2AB HFE SLC17A3 BTN3A2 HIST1H1D HIST1H2BI HIST1H1C BTN3A3 HIST1H3G BTN3A1 HIST1H3D HIST1H2BE TRIM38 HIST1H4H HCG11 BTN2A2 HIST1H3C HIST1H2AC HIST1H2AE BTN2A3P HIST1H2BF LOC285819 HIST1H4D HIST1H4G HIST1H4A HIST1H3A HIST1H2BD HIST1H2AD HIST1H4C HIST1H1A HIST1H3E SLC17A2 HIST1H4F HIST1H2BG HIST1H1T HIST1H2BB HIST1H3F BTN2A1 HIST1H2BH HIST1H1E
esv2731730	Chr.6:26378223 - 26453505 on Build GRCh38	Deletion	BTN2A2 BTN3A3 BTN3A1 BTN2A3P BTN3A2
esv3608402	Chr.6:26368480 - 26444267 on Build GRCh38	Loss	BTN2A2 BTN3A3 BTN3A1 BTN2A3P BTN3A2
esv2731728	Chr.6:26377986 - 26415008 on Build GRCh38	Deletion	BTN2A2 BTN3A1 BTN3A2
nsv601184	Chr.6:26379309 - 26451325 on Build GRCh38	Gain	BTN2A2 BTN3A3 BTN3A1 BTN2A3P BTN3A2
esv3890802	Chr.6:26369321 - 26442557 on Build GRCh38	Loss	BTN2A2 BTN3A3 BTN3A1 BTN2A3P BTN3A2

More Information

Additional Information:

For this assay, SNP(s) [rs72500815] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

immunoglobulin receptor superfamily

Gene Ontology Categories:

Process(es)

adaptive immune response
cytokine secretion
activated T cell proliferation
T cell receptor signaling pathway
interferon-gamma secretion
T cell mediated immunity

Function(s)

protein binding