Hs04964607_cn

• Gene Symbol: CLEC5A
• Assay Reference Genome Location: Chr.7:141932483 on build GRCh38
• Cytoband: 7q34

Target Gene Details

• Entrez Gene ID: 23601
• Gene Name: C-type lectin domain family 5 member A
• Gene Aliases: CLECSF5, MDL-1, MDL1
• Location: Chr.7:141927356-141947009 on Build GRCh38
• Assay Gene Location: Within Intron 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CLEC5A	NM_001301167.1			NP_001288096.1
	NM_013252.2			NP_037384.1
	XM_011515995.2			XP_011514297.1
	XM_017011915.1			XP_016867404.1
	XM_017011916.1			XP_016867405.1
	XM_017011917.1			XP_016867406.1
	AF139768.1			AAF02491.1
	AJ271684.1			CAB71334.1
	AK292766.1
	AK295200.1
	AK307095.1
	AK313703.1
	BC093714.1			AAH93714.1
	BC112099.1			AAI12100.1
	BC113098.1
	BC113099.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv831161	Chr.7:141847054 - 142010406 on Build GRCh38	Loss	CLEC5A OR9A1P MGAM OR9A4 TAS2R38 PRSS37
nsv5974	Chr.7:141902519 - 141943197 on Build GRCh38	Deletion	CLEC5A OR9A4

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

osteoblast development
cellular defense response
signal transduction
myeloid cell differentiation
negative regulation of myeloid cell apoptotic process
negative regulation of apoptotic process
innate immune response
viral entry into host cell
positive regulation of cytokine secretion

Function(s)

virus receptor activity
carbohydrate binding