Genomic Map
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Target Gene Details
Entrez Gene ID: | 100316868 |
Gene Name: | HOXA distal transcript antisense RNA |
Gene Aliases: |
HOXA-AS6, HOXA13-AS1, NCRNA00213 |
Location: |
Chr.7:27200421-27207259 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| HOTTIP | NR_037843.3 | 3 | 4550 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv606469 | Chr.7:27181212 - 27207660 on Build GRCh38 | Loss |
 HOTTIP
HOXA11
HOXA11-AS
HOXA13
|
| dgv1094n67 | Chr.7:27079675 - 27255391 on Build GRCh38 | Gain |
HOTTIP
HOXA11
HOXA9
HOXA2
MIR196B
HOXA1
HOXA3
HOXA10-AS
HOXA11-AS
EVX1-AS
HOXA6
HOXA-AS3
HOXA7
HOXA4
HOXA10-HOXA9
HOTAIRM1
EVX1
HOXA10
HOXA-AS2
HOXA13
HOXA5
|
| nsv519583 | Chr.7:27204343 - 27258645 on Build GRCh38 | Gain |
HOTTIP
EVX1
EVX1-AS
|
| nsv5675 | Chr.7:27178983 - 27213211 on Build GRCh38 | Insertion |
HOTTIP
HOXA11
HOXA10-HOXA9
HOXA10
HOXA11-AS
HOXA13
|
| nsv824042 | Chr.7:27129612 - 27207613 on Build GRCh38 | Gain |
HOTTIP
HOXA11
HOXA9
MIR196B
HOXA3
HOXA10-AS
HOXA11-AS
HOXA6
HOXA-AS3
HOXA7
HOXA4
HOXA10-HOXA9
HOXA10
HOXA13
HOXA5
|
| nsv606468 | Chr.7:27162670 - 27241685 on Build GRCh38 | Loss |
HOTTIP
HOXA11
HOXA9
HOXA10-HOXA9
MIR196B
HOXA10
HOXA10-AS
HOXA11-AS
HOXA13
EVX1-AS
|
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Intragenic