Hs04971230_cn

• Gene Symbol: SSBP1
• Assay Reference Genome Location: Chr.7:141748625 on build GRCh38
• Cytoband: 7q34

Target Gene Details

• Entrez Gene ID: 6742
• Gene Name: single stranded DNA binding protein 1
• Gene Aliases: Mt-SSB, SOSS-B1, SSBP, mtSSB
• Location: Chr.7:141738309-141750488 on Build GRCh38
• Assay Gene Location: Within Intron 8

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SSBP1	NM_001256510.1			NP_001243439.1
	NM_001256511.1			NP_001243440.1
	NM_001256512.1			NP_001243441.1
	NM_001256513.1			NP_001243442.1
	NM_003143.2			NP_003134.1
	NR_046269.1
	AF277319.1			AAK69112.1
	AK313033.1
	BC000895.1			AAH00895.1
	BC093054.1			AAH93054.1
	BF131408.1
	BP308841.1
	BQ959702.1
	BU532904.1
	M94556.1			AAA36332.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv34135	Chr.7:141347654 - 141793098 on Build GRCh38	Loss	SSBP1 TMEM178B TAS2R4 WEE2-AS1 KIAA1147 WEE2 TAS2R5 AGK TAS2R3

More Information

Additional Information:

For this assay, SNP(s) [rs113469479,rs142524008] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

DNA metabolism protein

Gene Ontology Categories:

Process(es)

DNA replication
mitochondrion organization
positive regulation of helicase activity
mitochondrion morphogenesis

Function(s)

chromatin binding
single-stranded DNA binding
protein binding
poly(A) RNA binding