Hs04998411_cn

• Gene Symbol: HOTTIP
• Assay Reference Genome Location: Chr.7:27203883 on build GRCh38
• Cytoband: 7p15.2

Target Gene Details

• Entrez Gene ID: 100316868
• Gene Name: HOXA distal transcript antisense RNA
• Gene Aliases: HOXA-AS6, HOXA13-AS1, NCRNA00213
• Location: Chr.7:27200421-27207259 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
HOTTIP	NR_037843.3
	GU724873.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv606469	Chr.7:27181212 - 27207660 on Build GRCh38	Loss	HOTTIP HOXA11-AS HOXA11 HOXA13
dgv1094n67	Chr.7:27079675 - 27255391 on Build GRCh38	Gain	HOXA10-HOXA9 HOXA2 HOTTIP HOXA9 HOXA-AS3 HOXA-AS2 HOXA3 HOTAIRM1 HOXA13 HOXA4 HOXA6 MIR196B HOXA7 HOXA1 HOXA11-AS HOXA11 HOXA5 EVX1-AS HOXA10 EVX1 HOXA10-AS
nsv5675	Chr.7:27178983 - 27213211 on Build GRCh38	Insertion	HOXA10-HOXA9 HOTTIP HOXA11-AS HOXA11 HOXA10 HOXA13
nsv824042	Chr.7:27129612 - 27207613 on Build GRCh38	Gain	HOXA10-HOXA9 HOTTIP HOXA9 HOXA-AS3 HOXA3 HOXA13 HOXA4 HOXA6 MIR196B HOXA7 HOXA11-AS HOXA11 HOXA5 HOXA10 HOXA10-AS
nsv606468	Chr.7:27162670 - 27241685 on Build GRCh38	Loss	HOXA10-HOXA9 MIR196B HOTTIP HOXA11-AS HOXA11 HOXA9 EVX1-AS HOXA10 HOXA10-AS HOXA13

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation