Hs05001346_cn

• Gene Symbol: FAM188B
• Assay Reference Genome Location: Chr.7:30772908 on build GRCh38
• Cytoband: 7p14.3

Target Gene Details

• Entrez Gene ID: 84182
• Gene Name: family with sequence similarity 188 member B
• Gene Aliases: C7orf67
• Location: Chr.7:30771417-30892387 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
FAM188B	NM_032222.2			NP_115598.2
	AF538962.1			AAQ10898.1
	AK026027.1			BAB15327.1
	BC098569.1			AAH98569.1
	DA868176.1

Target Gene Details

• Entrez Gene ID: 100526825
• Gene Name: INMT-FAM188B readthrough (NMD candidate)
• Gene Aliases: -
• Location: Chr.7:30752135-30892387 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
INMT-FAM188B	NR_037598.1
	AK308762.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv606507	Chr.7:30755672 - 30801825 on Build GRCh38	Loss	INMT INMT-FAM188B FAM188B
dgv6316n100	Chr.7:30609596 - 31145482 on Build GRCh38	Gain	GARS INMT CRHR2 INMT-FAM188B ADCYAP1R1 FAM188B GHRHR AQP1
nsv830938	Chr.7:30644614 - 30857907 on Build GRCh38	Gain	INMT CRHR2 INMT-FAM188B FAM188B
nsv527038	Chr.7:30617851 - 31122331 on Build GRCh38	Gain	GARS INMT CRHR2 INMT-FAM188B ADCYAP1R1 FAM188B GHRHR AQP1
esv2761316	Chr.7:30615466 - 31127062 on Build GRCh38	Gain	GARS INMT CRHR2 INMT-FAM188B ADCYAP1R1 FAM188B GHRHR AQP1
nsv606508	Chr.7:30772130 - 30797387 on Build GRCh38	Loss	INMT-FAM188B FAM188B
nsv830939	Chr.7:30704855 - 30871891 on Build GRCh38	Loss	INMT INMT-FAM188B FAM188B
nsv436557	Chr.7:30288062 - 32730902 on Build GRCh38	Deletion	ZNRF2P1 GHRHR GGCT CCDC129 GARS INMT LSM5 CRHR2 NEUROD6 MIR550A1 DKFZP586I1420 LOC100130673 PDE1C LOC401320 LINC01176 MIR550B1 INMT-FAM188B NOD1 ZNRF2 FAM188B AVL9 PPP1R17 LOC101928268 DPY19L1P1 ADCYAP1R1 AQP1

More Information

Additional Information:

For this assay, SNP(s) [rs78059384] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation