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See other RP9 CNV Assays ›
Gene Symbol
RP9
Assay Reference Genome
Location

Chr.7:33108232 on build GRCh38
Cytoband
7p14.3
Assay ID Hs05020748_cn
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Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 6100

Gene Name:

 retinitis pigmentosa 9 (autosomal dominant)

Gene Aliases:

 PAP-1, PAP1

Location:

 Chr.7:33094797-33109390 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
RP9 NM_203288.1 NP_976033.1
BC025928.1 AAH25928.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1029220 Chr.7:32881872 - 33222578 on Build GRCh38 Gain BBS9 KBTBD2 RP9 NT5C3A RP9P FKBP9
dgv1080e201 Chr.7:32621750 - 35008557 on Build GRCh38 Deletion MIR550B2 MIR548N BBS9 ZNRF2P1 BMPER KBTBD2 NT5C3A RP9P DPY19L1P1 LINC00997 NPSR1 LOC100421336 NPSR1-AS1 DPY19L1P2 RP9 DPY19L1 FKBP9 FLJ20712 MIR550A2
nsv830942 Chr.7:33008463 - 33207123 on Build GRCh38 Gain BBS9 RP9 NT5C3A
dgv1880e212 Chr.7:33086050 - 33150400 on Build GRCh38 Gain BBS9 RP9
esv2761318 Chr.7:33091075 - 33145870 on Build GRCh38 Gain BBS9 RP9
dgv1278e214 Chr.7:33090999 - 33149398 on Build GRCh38 Gain BBS9 RP9
nsv508450 Chr.7:33083723 - 33145236 on Build GRCh38 Deletion BBS9 RP9
dgv6319n100 Chr.7:33084393 - 33150979 on Build GRCh38 Gain BBS9 RP9
dgv11272n54 Chr.7:33092117 - 33156742 on Build GRCh38 Gain BBS9 RP9
nsv1135982 Chr.7:32794601 - 34893593 on Build GRCh38 Deletion LOC100421336 NPSR1-AS1 BBS9 DPY19L1P2 BMPER KBTBD2 RP9 NT5C3A RP9P FKBP9 FLJ20712 NPSR1
nsv436907 Chr.7:32668474 - 34999437 on Build GRCh38 Insertion MIR550B2 MIR548N BBS9 ZNRF2P1 BMPER KBTBD2 NT5C3A RP9P DPY19L1P1 LINC00997 NPSR1 LOC100421336 NPSR1-AS1 DPY19L1P2 RP9 DPY19L1 FKBP9 FLJ20712 MIR550A2

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More Information


Additional Information:

For this assay, SNP(s) [rs73307562] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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