Hs05082524_cn

• Gene Symbol: SMC5
• Assay Reference Genome Location: Chr.9:70260703 on build GRCh38
• Cytoband: 9q21.12

Target Gene Details

• Entrez Gene ID: 23137
• Gene Name: structural maintenance of chromosomes 5
• Gene Aliases: SMC5L1
• Location: Chr.9:70258962-70354873 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SMC5	NM_015110.3			NP_055925.2
	XM_005251837.1			XP_005251894.1
	XM_005251838.1			XP_005251895.1
	XM_005251839.1			XP_005251896.1
	XM_017014507.1			XP_016869996.1
	XM_017014508.1			XP_016869997.1
	XM_017014509.1			XP_016869998.1
	AB011166.2
	AJ310550.1			CAC39247.1
	AK055825.1
	AK304133.1
	BC017666.1
	BC038225.1			AAH38225.1
	DB220819.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1047862	Chr.9:70131959 - 70523371 on Build GRCh38	Gain	MAMDC2-AS1 SMC5 MAMDC2 SMC5-AS1 KLF9
nsv831615	Chr.9:70237789 - 70404776 on Build GRCh38	Gain	SMC5 SMC5-AS1 KLF9

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

telomere maintenance via recombination
double-strand break repair via homologous recombination
double-strand break repair via nonhomologous end joining
cellular response to DNA damage stimulus
sister chromatid cohesion
mitotic nuclear division
protein sumoylation
positive regulation of maintenance of mitotic sister chromatid cohesion
cell division
positive regulation of chromosome segregation
resolution of recombination intermediates
cellular senescence

Function(s)

protein binding
ATP binding