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See other KATNBL1 CNV Assays ›
Gene Symbol
KATNBL1
Assay Reference Genome
Location

Chr.15:34151851 on build GRCh38
Cytoband
15q14
Assay ID Hs05323733_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 79768

Gene Name:

 katanin regulatory subunit B1 like 1

Gene Aliases:

 C15orf29

Location:

 Chr.15:34140674-34210146 on Build GRCh38

Assay Gene Location:

 Within Intron 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
KATNBL1 NM_024713.2 NP_078989.1
XM_005254668.3 XP_005254725.1
XM_017022571.1 XP_016878060.1
XM_017022572.1 XP_016878061.1
XM_017022573.1 XP_016878062.1
XM_017022574.1 XP_016878063.1
XM_017022575.1 XP_016878064.1
AK026210.1 BAB15394.1
AK293021.1
AK293695.1
AK297904.1
AK311338.1
AL136908.1 CAB66842.1
AL833631.1
BC026234.1 AAH26234.1
BC111000.1 AAI11001.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1052620 Chr.15:32612402 - 34538731 on Build GRCh38 Gain MIR1233-2 LOC101928134 LPCAT4 MIR1233-1 ARHGAP11A LOC105370757 GOLGA8A LOC100131315 RYR3 TMCO5B CHRM5 NUTM1 EMC4 NOP10 AVEN KATNBL1 EMC7 SCG5 GOLGA8B GREM1 SLC12A6 PGBD4 LOC101928042 FMN1
esv33337 Chr.15:31689863 - 34575097 on Build GRCh38 Gain+Loss MIR1233-2 LOC101928134 LPCAT4 MIR1233-1 LOC105370757 GOLGA8A LOC100653133 LOC100131315 RYR3 NUTM1 CHRNA7 NOP10 LOC100996255 GOLGA8O EMC7 GOLGA8B SLC12A6 WHAMMP1 FMN1 GOLGA8K ARHGAP11A LOC105370940 TMCO5B CHRM5 EMC4 ULK4P1 LOC101060588 AVEN KATNBL1 SCG5 GREM1 GOLGA8N PGBD4 LOC101928042
esv3569431 Chr.15:33564570 - 35080307 on Build GRCh38 Gain MIR1233-2 LPCAT4 MIR1233-1 LOC101928174 GOLGA8A RYR3 CHRM5 NUTM1 EMC4 ZNF770 NOP10 AVEN ACTC1 KATNBL1 EMC7 GOLGA8B SLC12A6 PGBD4 GJD2 AQR
dgv4456n54 Chr.15:32604149 - 34557061 on Build GRCh38 Gain MIR1233-2 LOC101928134 LPCAT4 MIR1233-1 LOC105370757 GOLGA8A LOC100131315 RYR3 NUTM1 NOP10 EMC7 GOLGA8B SLC12A6 FMN1 ARHGAP11A TMCO5B CHRM5 EMC4 AVEN KATNBL1 SCG5 GREM1 GOLGA8N PGBD4 LOC101928042

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More Information


Additional Information:

For this assay, SNP(s) [rs147640282] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Process(es)


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