Hs05355154_cn

• Gene Symbol: RTF1
• Assay Reference Genome Location: Chr.15:41447176 on build GRCh38
• Cytoband: 15q15.1

Target Gene Details

• Entrez Gene ID: 23168
• Gene Name: RTF1 homolog, Paf1/RNA polymerase II complex component
• Gene Aliases: GTL7, KIAA0252
• Location: Chr.15:41417104-41483563 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
RTF1	NM_015138.4			NP_055953.3
	AK292302.1
	BC015052.2			AAH15052.1
	BF979715.1
	D87440.2			BAA13382.2

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1039283	Chr.15:41328301 - 41453282 on Build GRCh38	Gain	NDUFAF1 RTF1 OIP5 NUSAP1
dgv2580n100	Chr.15:41267962 - 41453282 on Build GRCh38	Gain	NDUFAF1 RTF1 CHP1 OIP5-AS1 OIP5 NUSAP1
nsv524476	Chr.15:41397034 - 41528002 on Build GRCh38	Loss	NDUFAF1 RTF1 RPAP1 LTK ITPKA

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
endodermal cell fate commitment
blastocyst growth
transcription elongation from RNA polymerase II promoter
Wnt signaling pathway
stem cell population maintenance
positive regulation of transcription elongation from RNA polymerase II promoter
positive regulation of transcription from RNA polymerase II promoter
positive regulation of histone H3-K4 methylation
histone H3-K4 trimethylation

Function(s)

single-stranded DNA binding
protein binding
poly(A) RNA binding