Genomic Map
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Target Gene Details
Entrez Gene ID: | 1136 |
Gene Name: | cholinergic receptor nicotinic alpha 3 subunit |
Gene Aliases: |
LNCR2, NACHRA3, PAOD2 |
Location: |
Chr.15:78593052-78621295 on Build GRCh38 |
Assay Gene Location: | Within Exon 2 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| CHRNA3 | NM_000743.4 | NP_000734.2 | ||
| NM_001166694.1 | NP_001160166.1 | |||
| NR_046313.1 | ||||
| XM_006720382.2 | 1 | 86 | XP_006720445.1 | |
| AF385584.1 | AAK68110.1 | |||
| BC000513.2 | AAH00513.1 | |||
| BC001642.2 | AAH01642.1 | |||
| BC002996.1 | AAH02996.1 | |||
| BC006114.1 | AAH06114.1 | |||
| BC098443.1 | AAH98443.1 | |||
| BT006646.1 | AAP35292.1 | |||
| BT006897.1 | AAP35543.1 | |||
| M37981.1 | AAA59942.1 | |||
| U62432.1 | AAB40110.1 | |||
| Y08418.1 | CAA69695.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv1628 | Chr.15:78617170 - 78649604 on Build GRCh38 | Insertion |
 CHRNB4
CHRNA3
|
| nsv1045827 | Chr.15:78615314 - 78712300 on Build GRCh38 | Gain |
CHRNB4
CHRNA3
|
| nsv457208 | Chr.15:78615690 - 78727268 on Build GRCh38 | Gain |
CHRNB4
CHRNA3
|
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Additional Information:
For this assay, SNP(s) [rs117832812] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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