Hs05421454_cn

• Gene Symbol: NFATC2IP
• Assay Reference Genome Location: Chr.16:28956854 on build GRCh38
• Cytoband: 16p11.2

Target Gene Details

• Entrez Gene ID: 84901
• Gene Name: nuclear factor of activated T-cells 2 interacting protein
• Gene Aliases: ESC2, NIP45, RAD60
• Location: Chr.16:28950988-28967097 on Build GRCh38
• Assay Gene Location: Within Intron 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
NFATC2IP	NM_032815.3			NP_116204.3
	AF458593.1			AAM49721.1
	AK027545.1			BAB55189.1
	AK074761.1			BAC11189.1
	BC018311.1
	BC021551.1
	BC068007.1			AAH68007.1
	BC080628.1			AAH80628.1
	BC101741.1			AAI01742.1
	BC112182.1			AAI12183.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv4987n54	Chr.16:28824884 - 29032129 on Build GRCh38	Gain	ATP2A1-AS1 MIR4517 ATXN2L LAT ATP2A1 SH2B1 MIR4721 CD19 NFATC2IP RABEP2 TUFM SPNS1
esv3892826	Chr.16:28814728 - 29032129 on Build GRCh38	Gain+Loss	ATP2A1-AS1 MIR4517 ATXN2L LAT ATP2A1 SH2B1 MIR4721 CD19 NFATC2IP RABEP2 TUFM SPNS1
esv2758640	Chr.16:28163817 - 29139232 on Build GRCh38	Gain+Loss	ATP2A1-AS1 ATXN2L CLN3 EIF3CL MIR4721 CD19 NUPR1 NPIPB9 SPNS1 MIR6862-2 MIR4517 NPIP XPO6 EIF3C NPIPB6 SULT1A2 SBK1 RABEP2 IL27 SULT1A1 SGF29 RRN3P2 NPIPB8 LAT ATP2A1 LOC101928215 SH2B1 APOBR NFATC2IP MIR6862-1 TUFM
nsv518648	Chr.16:28826194 - 29032129 on Build GRCh38	Loss	ATP2A1-AS1 MIR4517 ATXN2L LAT ATP2A1 SH2B1 MIR4721 CD19 NFATC2IP RABEP2 TUFM SPNS1
nsv1059555	Chr.16:28373144 - 29195838 on Build GRCh38	Gain	ATP2A1-AS1 ATXN2L CLN3 EIF3CL MIR4721 CD19 NUPR1 NPIPB9 SPNS1 MIR6862-2 MIR4517 NPIP EIF3C LOC107984832 SULT1A2 RABEP2 IL27 SULT1A1 SGF29 RRN3P2 NPIPB8 LAT ATP2A1 LOC101928215 SH2B1 APOBR NFATC2IP MIR6862-1 TUFM
dgv2831n100	Chr.16:28812594 - 29032542 on Build GRCh38	Gain	ATP2A1-AS1 MIR4517 ATXN2L LAT ATP2A1 SH2B1 MIR4721 CD19 NFATC2IP RABEP2 TUFM SPNS1
esv3570454	Chr.16:28799004 - 29032129 on Build GRCh38	Gain	ATP2A1-AS1 MIR4517 ATXN2L LAT ATP2A1 SH2B1 MIR4721 CD19 NFATC2IP RABEP2 TUFM SPNS1
nsv571805	Chr.16:28824174 - 29032129 on Build GRCh38	Loss	ATP2A1-AS1 MIR4517 ATXN2L LAT ATP2A1 SH2B1 MIR4721 CD19 NFATC2IP RABEP2 TUFM SPNS1
dgv2830n100	Chr.16:28620264 - 29032542 on Build GRCh38	Gain	ATP2A1-AS1 ATXN2L SULT1A1 MIR4721 CD19 NPIPB9 SPNS1 MIR6862-2 NPIPB8 MIR4517 LAT EIF3C ATP2A1 SH2B1 NFATC2IP RABEP2 TUFM

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

cytokine production
protein sumoylation
positive regulation of transcription from RNA polymerase II promoter

Function(s)

protein tag