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See other ANKRD11 CNV Assays ›
Gene Symbol
ANKRD11
Assay Reference Genome
Location

Chr.16:89269534 on build GRCh38
Cytoband
16q24.3
Assay ID Hs05422602_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 29123

Gene Name:

 ankyrin repeat domain 11

Gene Aliases:

 ANCO-1, ANCO1, LZ16, T13

Location:

 Chr.16:89267619-89490561 on Build GRCh38

Assay Gene Location:

 Within Exon 20
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ANKRD11 NM_001256182.1 NP_001243111.1
NM_001256183.1 NP_001243112.1
NM_013275.5 NP_037407.4
XM_006721181.1 XP_006721244.1
XM_006721184.2 XP_006721247.1
XM_011523051.2 XP_011521353.1
XM_011523053.2 XP_011521355.1
XM_011523054.2 XP_011521356.1
XM_011523055.2 XP_011521357.1
XM_011523056.2 XP_011521358.1
XM_011523057.2 13 9308 XP_011521359.1
XM_017023182.1 XP_016878671.1
XM_017023183.1 XP_016878672.1
XM_017023184.1 XP_016878673.1
XM_017023185.1 XP_016878674.1
XM_017023186.1 XP_016878675.1
XM_017023187.1 XP_016878676.1
AY373756.1 AAR25661.1
AY533563.1 AAS45544.1
KJ534770.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv509638 Chr.16:89152681 - 89296203 on Build GRCh38 Insertion ZNF778 LOC105371414 ACSF3 SLC22A31 ANKRD11 CDH15 LOC400558 LINC00304
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss ZNF276 LOC105371419 SPATA2L CENPBD1 VPS9D1-AS1 LOC101927817 GAS8 CDK10 SPG7 RPL13 CHMP1A AFG3L1P CPNE7 FAM157C TUBB3 GAS8-AS1 PRDM7 TCF25 MC1R FANCA ANKRD11 SPATA33 DPEP1 LOC100287036 ZNF778 LOC105371414 TUBB8P7 LOC107984817 URAHP SNORD68 DEF8 SPIRE2 DBNDD1 VPS9D1
nsv469681 Chr.16:89206785 - 89364930 on Build GRCh38 Loss LOC100287036 ZNF778 LOC105371414 ANKRD11
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain GALNS LOC339059 LOC107987238 LOC101927793 PIEZO1 ACSF3 LOC105371409 SLC22A31 CDT1 ANKRD11 CDH15 LOC100129697 LOC100287036 ZNF778 LOC105371414 APRT LOC100289580 CBFA2T3 PABPN1L TRAPPC2L LOC400558 LINC00304
nsv827843 Chr.16:89216602 - 89298922 on Build GRCh38 Gain ZNF778 LOC105371414 ANKRD11
nsv457622 Chr.16:89207475 - 89319153 on Build GRCh38 Loss ZNF778 LOC105371414 ANKRD11
dgv3066n100 Chr.16:89067685 - 89301626 on Build GRCh38 Gain ZNF778 LOC105371414 ACSF3 SLC22A31 ANKRD11 CDH15 LOC400558 LINC00304
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss GALNS LOC339059 CTU2 LOC101927793 CENPBD1 VPS9D1-AS1 GAS8 SPG7 SNAI3-AS1 LOC100289580 CHMP1A AFG3L1P CPNE7 PABPN1L TRAPPC2L MVD LOC400558 GAS8-AS1 MIR4722 LOC105371409 FANCA ANKRD11 LOC100287036 TUBB8P7 CBFA2T3 LOC107984817 DEF8 SPIRE2 VPS9D1 LINC00304 ZNF276 LOC107987238 LOC105371419 SPATA2L CYBA LOC101927817 SNAI3 CDK10 RPL13 IL17C RNF166 FAM157C TUBB3 PRDM7 TCF25 PIEZO1 ACSF3 MC1R SLC22A31 CDT1 CDH15 LOC100129697 SPATA33 DPEP1 ZNF778 LOC105371414 APRT URAHP SNORD68 DBNDD1
esv2763149 Chr.16:89179547 - 89368114 on Build GRCh38 Gain LOC100287036 ZNF778 LOC105371414 SLC22A31 ANKRD11 CDH15
nsv952073 Chr.16:89247293 - 89304992 on Build GRCh38 Deletion LOC105371414 ANKRD11

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More Information


Additional Information:

For this assay, SNP(s) [rs76276959] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Function(s)


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