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See other CHMP1A CNV Assays ›
Gene Symbol
CHMP1A
Assay Reference Genome
Location

Chr.16:89656633 on build GRCh38
Cytoband
16q24.3
Assay ID Hs05431395_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 5119

Gene Name:

 charged multivesicular body protein 1A

Gene Aliases:

 CHMP1, PCH8, PCOLN3, PRSM1, VPS46-1, VPS46A

Location:

 Chr.16:89644431-89657785 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHMP1A NM_001083314.3 NP_001076783.1
NM_002768.4 NP_002759.2
NR_046418.2
XM_011523098.1 XP_011521400.1
AF281063.1 AAG01448.1
AK302055.1
BC132711.1
BC132713.1
BG480548.1
BI826757.1
BX363674.2
CF131483.1
D38554.1 BAA07557.1
HY008690.1
HY089525.1
U58048.1 AAC50775.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762221 Chr.16:89610380 - 90039318 on Build GRCh38 Gain+Loss DBNDD1 SPATA33 CDK10 SPATA2L LOC105371419 DEF8 TUBB3 CHMP1A FANCA CENPBD1 MC1R SPIRE2 AFG3L1P VPS9D1-AS1 DPEP1 ZNF276 LOC107984817 GAS8 GAS8-AS1 TCF25 VPS9D1
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss LOC101927817 PRDM7 SPATA33 SPATA2L LOC100287036 LOC105371419 DEF8 CHMP1A FANCA MC1R TUBB8P7 SPIRE2 DPEP1 FAM157C RPL13 GAS8 TCF25 DBNDD1 LOC105371414 CDK10 SNORD68 TUBB3 URAHP CENPBD1 SPG7 AFG3L1P VPS9D1-AS1 ZNF778 ANKRD11 ZNF276 LOC107984817 GAS8-AS1 CPNE7 VPS9D1
nsv573739 Chr.16:89625890 - 89696855 on Build GRCh38 Gain SPATA33 CDK10 SPATA2L DPEP1 CHMP1A
nsv1063483 Chr.16:89347250 - 89661187 on Build GRCh38 Gain LOC101927817 SPATA33 SPG7 SNORD68 ANKRD11 DPEP1 RPL13 CHMP1A CPNE7
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss PRDM7 SPATA2L LOC100287036 CHMP1A TRAPPC2L GALNS FANCA LINC00304 CDH15 PIEZO1 LOC100129697 TUBB8P7 MVD CDT1 ACSF3 GAS8 TCF25 DBNDD1 SNAI3-AS1 CDK10 LOC101927793 TUBB3 LOC339059 LOC105371409 VPS9D1-AS1 ANKRD11 ZNF276 GAS8-AS1 LOC101927817 SPATA33 LOC105371419 DEF8 RNF166 MC1R PABPN1L LOC400558 SPIRE2 DPEP1 FAM157C SNAI3 RPL13 LOC100289580 APRT LOC105371414 CYBA SNORD68 CTU2 MIR4722 CBFA2T3 URAHP SLC22A31 CENPBD1 SPG7 AFG3L1P ZNF778 LOC107987238 IL17C LOC107984817 CPNE7 VPS9D1
nsv509639 Chr.16:89513538 - 89775915 on Build GRCh38 Insertion SPATA33 CDK10 SPATA2L SNORD68 CHMP1A FANCA SPG7 VPS9D1-AS1 DPEP1 ZNF276 RPL13 CPNE7 VPS9D1
nsv1066382 Chr.16:89537178 - 89661187 on Build GRCh38 Gain SPATA33 SPG7 SNORD68 DPEP1 RPL13 CHMP1A CPNE7

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