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See other ANKRD11 CNV Assays ›
Gene Symbol
ANKRD11
Assay Reference Genome
Location

Chr.16:89270183 on build GRCh38
Cytoband
16q24.3
Assay ID Hs05440308_cn
Size
Availability Made To Order
Catalog # 4400291
Price 475.00
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Assay Details

Target Gene Details

Entrez Gene ID:

 29123

Gene Name:

 ankyrin repeat domain 11

Gene Aliases:

 ANCO-1, ANCO1, LZ16, T13

Location:

 Chr.16:89267619-89490561 on Build GRCh38

Assay Gene Location:

 Within Exon 20
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ANKRD11 NM_001256182.1 NP_001243111.1
NM_001256183.1 NP_001243112.1
NM_013275.5 NP_037407.4
XM_006721181.1 XP_006721244.1
XM_006721184.2 XP_006721247.1
XM_011523051.2 XP_011521353.1
XM_011523053.2 XP_011521355.1
XM_011523054.2 XP_011521356.1
XM_011523055.2 XP_011521357.1
XM_011523056.2 XP_011521358.1
XM_011523057.2 13 8659 XP_011521359.1
XM_017023182.1 XP_016878671.1
XM_017023183.1 XP_016878672.1
XM_017023184.1 XP_016878673.1
XM_017023185.1 XP_016878674.1
XM_017023186.1 XP_016878675.1
XM_017023187.1 XP_016878676.1
AY373756.1 AAR25661.1
AY533563.1 AAS45544.1
KJ534770.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv509638 Chr.16:89152681 - 89296203 on Build GRCh38 Insertion LOC400558 LINC00304 ACSF3 ZNF778 CDH15 SLC22A31 LOC105371414 ANKRD11
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss LOC107984817 SPATA33 AFG3L1P CPNE7 VPS9D1-AS1 ZNF778 RPL13 DBNDD1 SNORD68 SPATA2L DEF8 CDK10 FANCA TCF25 CHMP1A SPIRE2 LOC100287036 CENPBD1 GAS8-AS1 URAHP TUBB8P7 LOC105371419 PRDM7 LOC101927817 ZNF276 TUBB3 GAS8 MC1R SPG7 DPEP1 VPS9D1 LOC105371414 FAM157C ANKRD11
nsv469681 Chr.16:89206785 - 89364930 on Build GRCh38 Loss ZNF778 LOC100287036 LOC105371414 ANKRD11
nsv827843 Chr.16:89216602 - 89298922 on Build GRCh38 Gain ZNF778 LOC105371414 ANKRD11
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain CDT1 APRT LOC400558 LINC00304 LOC100289580 LOC100287036 LOC105371409 LOC107987238 LOC339059 ACSF3 ZNF778 PIEZO1 TRAPPC2L CDH15 LOC101927793 LOC100129697 SLC22A31 GALNS PABPN1L LOC105371414 ANKRD11 CBFA2T3
nsv457622 Chr.16:89207475 - 89319153 on Build GRCh38 Loss ZNF778 LOC105371414 ANKRD11
dgv3066n100 Chr.16:89067685 - 89301626 on Build GRCh38 Gain LOC400558 LINC00304 ACSF3 ZNF778 CDH15 SLC22A31 LOC105371414 ANKRD11
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss MIR4722 SPATA33 CYBA AFG3L1P VPS9D1-AS1 ZNF778 RNF166 RPL13 SNAI3 TRAPPC2L DBNDD1 SNORD68 SLC22A31 DEF8 CDK10 IL17C APRT LINC00304 SPIRE2 GAS8-AS1 LOC105371409 TUBB8P7 PRDM7 ZNF276 TUBB3 GAS8 PIEZO1 MC1R SPG7 DPEP1 VPS9D1 LOC105371414 SNAI3-AS1 LOC107984817 CTU2 CPNE7 CDH15 LOC100129697 SPATA2L PABPN1L CDT1 FANCA TCF25 LOC400558 CHMP1A LOC100289580 LOC100287036 CENPBD1 URAHP LOC107987238 LOC105371419 LOC339059 LOC101927817 ACSF3 LOC101927793 GALNS MVD FAM157C ANKRD11 CBFA2T3
esv2763149 Chr.16:89179547 - 89368114 on Build GRCh38 Gain ZNF778 LOC100287036 CDH15 SLC22A31 LOC105371414 ANKRD11
nsv952073 Chr.16:89247293 - 89304992 on Build GRCh38 Deletion LOC105371414 ANKRD11

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More Information


Additional Information:

For this assay, SNP(s) [rs116222098] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Function(s)


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