Hs05440482_cn

• Gene Symbol: ANKRD11
• Assay Reference Genome Location: Chr.16:89277540 on build GRCh38
• Cytoband: 16q24.3

Target Gene Details

• Entrez Gene ID: 29123
• Gene Name: ankyrin repeat domain 11
• Gene Aliases: ANCO-1, ANCO1, LZ16, T13
• Location: Chr.16:89267619-89490561 on Build GRCh38
• Assay Gene Location: Within Intron 16

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ANKRD11	NM_001256182.1			NP_001243111.1
	NM_001256183.1			NP_001243112.1
	NM_013275.5			NP_037407.4
	XM_006721181.1			XP_006721244.1
	XM_006721184.2			XP_006721247.1
	XM_011523051.2			XP_011521353.1
	XM_011523053.2			XP_011521355.1
	XM_011523054.2			XP_011521356.1
	XM_011523055.2			XP_011521357.1
	XM_011523056.2			XP_011521358.1
	XM_011523057.2			XP_011521359.1
	XM_017023182.1			XP_016878671.1
	XM_017023183.1			XP_016878672.1
	XM_017023184.1			XP_016878673.1
	XM_017023185.1			XP_016878674.1
	XM_017023186.1			XP_016878675.1
	XM_017023187.1			XP_016878676.1
	AK093762.1	1	2177
	AY373756.1			AAR25661.1
	AY533563.1			AAS45544.1
	KJ534770.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv509638	Chr.16:89152681 - 89296203 on Build GRCh38	Insertion	LOC400558 CDH15 SLC22A31 ACSF3 ANKRD11 LOC105371414 ZNF778 LINC00304
nsv428331	Chr.16:89216635 - 90185980 on Build GRCh38	Gain+Loss	LOC101927817 CPNE7 TCF25 DPEP1 SNORD68 LOC105371419 LOC100287036 LOC107984817 ANKRD11 GAS8-AS1 CDK10 SPATA33 VPS9D1-AS1 FAM157C URAHP DEF8 TUBB8P7 CHMP1A RPL13 GAS8 LOC105371414 ZNF778 MC1R ZNF276 DBNDD1 VPS9D1 AFG3L1P CENPBD1 SPG7 TUBB3 SPIRE2 SPATA2L PRDM7 FANCA
nsv469681	Chr.16:89206785 - 89364930 on Build GRCh38	Loss	LOC100287036 ANKRD11 LOC105371414 ZNF778
nsv827843	Chr.16:89216602 - 89298922 on Build GRCh38	Gain	ANKRD11 LOC105371414 ZNF778
nsv573674	Chr.16:88738775 - 89325907 on Build GRCh38	Gain	LOC400558 GALNS LOC101927793 LOC100287036 TRAPPC2L LOC105371409 ANKRD11 APRT LINC00304 LOC339059 LOC107987238 CDH15 SLC22A31 CDT1 ACSF3 PABPN1L LOC100289580 CBFA2T3 LOC100129697 PIEZO1 LOC105371414 ZNF778
nsv457622	Chr.16:89207475 - 89319153 on Build GRCh38	Loss	ANKRD11 LOC105371414 ZNF778
dgv3066n100	Chr.16:89067685 - 89301626 on Build GRCh38	Gain	LOC400558 CDH15 SLC22A31 ACSF3 ANKRD11 LOC105371414 ZNF778 LINC00304
nsv482951	Chr.16:88633593 - 90228345 on Build GRCh38	Loss	LOC101927817 DPEP1 LOC105371419 LOC101927793 CTU2 MVD SNAI3 APRT CDK10 FAM157C CYBA DEF8 ACSF3 CBFA2T3 LOC100129697 GAS8 ZNF778 SNAI3-AS1 MC1R ZNF276 TRAPPC2L AFG3L1P TUBB3 SPATA2L PABPN1L PRDM7 LOC100289580 LOC400558 CPNE7 TCF25 RNF166 GALNS SNORD68 LOC100287036 LOC107984817 ANKRD11 IL17C GAS8-AS1 LINC00304 SPATA33 LOC339059 VPS9D1-AS1 URAHP CDH15 SLC22A31 TUBB8P7 MIR4722 CHMP1A PIEZO1 RPL13 LOC105371414 DBNDD1 VPS9D1 LOC105371409 CENPBD1 SPG7 LOC107987238 SPIRE2 CDT1 FANCA
esv2763149	Chr.16:89179547 - 89368114 on Build GRCh38	Gain	CDH15 SLC22A31 LOC100287036 ANKRD11 LOC105371414 ZNF778
nsv952073	Chr.16:89247293 - 89304992 on Build GRCh38	Deletion	ANKRD11 LOC105371414

More Information

Additional Information:

For this assay, SNP(s) [rs77437800] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

in utero embryonic development
tissue homeostasis
multicellular organism growth
odontogenesis of dentin-containing tooth
skeletal system morphogenesis
face morphogenesis
bone development