Hs05442024_cn

• Gene Symbol: NFATC2IP
• Assay Reference Genome Location: Chr.16:28955443 on build GRCh38
• Cytoband: 16p11.2

Target Gene Details

• Entrez Gene ID: 84901
• Gene Name: nuclear factor of activated T-cells 2 interacting protein
• Gene Aliases: ESC2, NIP45, RAD60
• Location: Chr.16:28950988-28967097 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
NFATC2IP	NM_032815.3			NP_116204.3
	AF458593.1			AAM49721.1
	AK074761.1			BAC11189.1
	BC018311.1
	BC068007.1			AAH68007.1
	BC080628.1			AAH80628.1
	BC101741.1			AAI01742.1
	BC112182.1			AAI12183.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv4987n54	Chr.16:28824884 - 29032129 on Build GRCh38	Gain	ATP2A1-AS1 SPNS1 LAT ATXN2L TUFM MIR4721 CD19 NFATC2IP MIR4517 RABEP2 ATP2A1 SH2B1
esv3892826	Chr.16:28814728 - 29032129 on Build GRCh38	Gain+Loss	ATP2A1-AS1 SPNS1 LAT ATXN2L TUFM MIR4721 CD19 NFATC2IP MIR4517 RABEP2 ATP2A1 SH2B1
esv2758640	Chr.16:28163817 - 29139232 on Build GRCh38	Gain+Loss	NPIP EIF3C NFATC2IP SH2B1 LOC101928215 NPIPB6 SULT1A1 ATP2A1-AS1 SPNS1 MIR6862-1 EIF3CL NUPR1 NPIPB8 TUFM XPO6 RRN3P2 CLN3 SBK1 IL27 ATXN2L APOBR MIR4721 CD19 MIR6862-2 NPIPB9 LAT SGF29 SULT1A2 MIR4517 RABEP2 ATP2A1
nsv518648	Chr.16:28826194 - 29032129 on Build GRCh38	Loss	ATP2A1-AS1 SPNS1 LAT ATXN2L TUFM MIR4721 CD19 NFATC2IP MIR4517 RABEP2 ATP2A1 SH2B1
nsv1059555	Chr.16:28373144 - 29195838 on Build GRCh38	Gain	NPIP EIF3C NFATC2IP SH2B1 LOC101928215 SULT1A1 LOC107984832 ATP2A1-AS1 SPNS1 MIR6862-1 EIF3CL NUPR1 NPIPB8 TUFM RRN3P2 CLN3 IL27 ATXN2L APOBR MIR4721 CD19 MIR6862-2 NPIPB9 LAT SGF29 SULT1A2 MIR4517 RABEP2 ATP2A1
dgv2831n100	Chr.16:28812594 - 29032542 on Build GRCh38	Gain	ATP2A1-AS1 SPNS1 LAT ATXN2L TUFM MIR4721 CD19 NFATC2IP MIR4517 RABEP2 ATP2A1 SH2B1
esv3570454	Chr.16:28799004 - 29032129 on Build GRCh38	Gain	ATP2A1-AS1 SPNS1 LAT ATXN2L TUFM MIR4721 CD19 NFATC2IP MIR4517 RABEP2 ATP2A1 SH2B1
nsv571805	Chr.16:28824174 - 29032129 on Build GRCh38	Loss	ATP2A1-AS1 SPNS1 LAT ATXN2L TUFM MIR4721 CD19 NFATC2IP MIR4517 RABEP2 ATP2A1 SH2B1
dgv2830n100	Chr.16:28620264 - 29032542 on Build GRCh38	Gain	ATXN2L MIR4721 EIF3C CD19 NFATC2IP MIR6862-2 SH2B1 SULT1A1 NPIPB9 ATP2A1-AS1 SPNS1 LAT NPIPB8 TUFM MIR4517 RABEP2 ATP2A1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

cytokine production
protein sumoylation
positive regulation of transcription from RNA polymerase II promoter

Function(s)

protein tag