Hs05461556_cn

• Gene Symbol: COTL1
• Assay Reference Genome Location: Chr.16:84572224 on build GRCh38
• Cytoband: 16q24.1

Target Gene Details

• Entrez Gene ID: 23406
• Gene Name: coactosin like F-actin binding protein 1
• Gene Aliases: CLP
• Location: Chr.16:84565596-84618096 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
COTL1	NM_021149.3			NP_066972.1
	AK026033.1
	AK127352.1
	AK315675.1
	BC010039.2			AAH10039.1
	BC010884.1			AAH10884.1
	BC016702.1			AAH16702.1
	BC042970.1			AAH42970.1
	BC053682.1			AAH53682.1
	BT006968.1			AAP35614.1
	BX395081.2
	DA968872.1
	L54057.1			AAA88022.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833311	Chr.16:84489192 - 84663857 on Build GRCh38	Loss	KLHL36 COTL1 TLDC1
dgv5262n54	Chr.16:84381903 - 84583279 on Build GRCh38	Loss	COTL1 LOC105371374 TLDC1 ATP2C2
nsv573425	Chr.16:84298994 - 84575953 on Build GRCh38	Loss	WFDC1 COTL1 LOC105371374 TLDC1 ATP2C2
nsv1064308	Chr.16:84461124 - 84592674 on Build GRCh38	Loss	COTL1 LOC105371374 TLDC1 ATP2C2
dgv550e214	Chr.16:84569011 - 84602293 on Build GRCh38	Loss	COTL1
nsv483044	Chr.16:84166395 - 87066394 on Build GRCh38	Gain	FAM92B KIAA0513 MTHFSD LOC105376777 LOC146513 FLJ30679 CRISPLD2 FOXL1 KCNG4 COX4I1 FOXF1 KLHL36 COTL1 GSE1 ATP2C2 IRF8 C16orf74 EMC8 LOC102724344 LOC440390 TAF1C MIR6774 ADAD2 LOC101928614 FOXC2-AS1 LOC105371374 TLDC1 MIR1910 LINC00917 LOC400548 MIR5093 WFDC1 LINC01082 DNAAF1 FOXC2 LOC101928474 LINC00311 USP10 GINS2 LINC01081 ZDHHC7 LOC101928557 FENDRR

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

actin or actin-binding cytoskeletal protein, cytoskeletal protein, non-motor actin binding protein

Gene Ontology Categories:

Process(es)

biological_process
defense response to fungus

Function(s)

actin binding
protein binding
enzyme binding