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See other CHMP1A CNV Assays ›
Gene Symbol
CHMP1A
Assay Reference Genome
Location

Chr.16:89648498 on build GRCh38
Cytoband
16q24.3
Assay ID Hs05470250_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 5119

Gene Name:

 charged multivesicular body protein 1A

Gene Aliases:

 CHMP1, PCH8, PCOLN3, PRSM1, VPS46-1, VPS46A

Location:

 Chr.16:89644431-89657785 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 4 - Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHMP1A NM_001083314.3 NP_001076783.1
NM_002768.4 NP_002759.2
NR_046418.2
XM_011523098.1 XP_011521400.1
AF281063.1 AAG01448.1
AK302055.1
BC132711.1
BC132713.1
BG480548.1
BI826757.1
BT006841.1 AAP35487.1
BX363674.2
CF131483.1
D38554.1 BAA07557.1
HY008690.1
HY089525.1
U58048.1 AAC50775.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2715189 Chr.16:89647661 - 89648452 on Build GRCh38 Deletion CHMP1A
esv2762221 Chr.16:89610380 - 90039318 on Build GRCh38 Gain+Loss VPS9D1 SPATA2L GAS8-AS1 FANCA ZNF276 TUBB3 LOC105371419 AFG3L1P SPIRE2 CENPBD1 LOC107984817 SPATA33 TCF25 DPEP1 DBNDD1 GAS8 DEF8 VPS9D1-AS1 CHMP1A CDK10 MC1R
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss VPS9D1 SPATA2L ZNF276 TUBB8P7 TUBB3 ANKRD11 CENPBD1 SPATA33 DPEP1 GAS8 FAM157C RPL13 DEF8 CPNE7 SPG7 VPS9D1-AS1 CHMP1A CDK10 GAS8-AS1 LOC100287036 SNORD68 ZNF778 FANCA LOC105371419 PRDM7 AFG3L1P SPIRE2 LOC107984817 TCF25 DBNDD1 LOC105371414 URAHP LOC101927817 MC1R
nsv573739 Chr.16:89625890 - 89696855 on Build GRCh38 Gain SPATA33 DPEP1 SPATA2L CHMP1A CDK10
esv2715190 Chr.16:89648495 - 89649397 on Build GRCh38 Deletion CHMP1A
nsv1063483 Chr.16:89347250 - 89661187 on Build GRCh38 Gain SPATA33 DPEP1 RPL13 SNORD68 CPNE7 SPG7 CHMP1A LOC101927817 ANKRD11
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss CDH15 LOC107987238 TRAPPC2L SNAI3 ZNF276 TUBB8P7 LOC101927793 ANKRD11 GAS8 FAM157C RNF166 DEF8 SPG7 CHMP1A PABPN1L MIR4722 ACSF3 SPIRE2 PIEZO1 TCF25 DBNDD1 LOC105371414 URAHP LOC400558 LOC101927817 MC1R VPS9D1 SPATA2L LOC100289580 IL17C CYBA TUBB3 CENPBD1 GALNS SPATA33 DPEP1 LOC105371409 LOC100129697 RPL13 CPNE7 VPS9D1-AS1 SLC22A31 CDK10 CBFA2T3 MVD GAS8-AS1 CDT1 LOC100287036 SNORD68 ZNF778 FANCA LOC105371419 PRDM7 AFG3L1P LINC00304 LOC107984817 SNAI3-AS1 APRT CTU2 LOC339059
esv26093 Chr.16:89647512 - 89648437 on Build GRCh38 Gain+Loss CHMP1A
nsv509639 Chr.16:89513538 - 89775915 on Build GRCh38 Insertion VPS9D1 SPATA2L SNORD68 FANCA ZNF276 SPATA33 DPEP1 RPL13 CPNE7 SPG7 VPS9D1-AS1 CHMP1A CDK10
nsv1066382 Chr.16:89537178 - 89661187 on Build GRCh38 Gain SPATA33 DPEP1 RPL13 SNORD68 CPNE7 SPG7 CHMP1A

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