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See other TRPV1 CNV Assays ›
Gene Symbol
TRPV1
Assay Reference Genome
Location

Chr.17:3567510 on build GRCh38
Cytoband
17p13.2
Assay ID Hs05480151_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 7442

Gene Name:

 transient receptor potential cation channel subfamily V member 1

Gene Aliases:

 VR1

Location:

 Chr.17:3565446-3609411 on Build GRCh38

Assay Gene Location:

 Within Intron 18
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TRPV1 NM_018727.5 NP_061197.4
NM_080704.3 NP_542435.2
NM_080705.3 NP_542436.2
NM_080706.3 NP_542437.2
AF196175.1 AAG43466.1
AF196176.1 AAG43467.1
AJ272063.2 CAB89866.2
AJ277028.1 CAB95729.1
AL136801.1 CAB66735.1
AY131289.1 AAM89472.1
AY986821.1 AAX84657.1
BC132820.1
BC136633.1
DQ177332.1 ABA06605.1
DQ177333.1 ABA06606.1
DQ898279.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3892950 Chr.17:3131812 - 3577153 on Build GRCh38 Loss OR1A1 OR3A2 OR1E1 ASPA TRPV1 OR3A3 OR3A1 TRPV3 SPATA22 OR1A2 OR3A4P OR1E2 OR1D4
esv3892951 Chr.17:3566559 - 3597215 on Build GRCh38 Gain TRPV1
nsv1055740 Chr.17:3381841 - 3890153 on Build GRCh38 Gain NCBP3 TAX1BP3 OR3A2 OR1E1 ASPA P2RX5-TAX1BP3 CAMKK1 EMC6 TRPV1 ITGAE OR3A3 GSG2 P2RX5 TRPV3 SPATA22 CTNS SHPK OR1E2
esv3572354 Chr.17:3528675 - 3654158 on Build GRCh38 Gain TRPV3 CTNS SHPK TRPV1
dgv556e214 Chr.17:3560499 - 3573090 on Build GRCh38 Loss TRPV1
nsv516676 Chr.17:3553441 - 3652130 on Build GRCh38 Gain+Loss TRPV3 CTNS SHPK TRPV1
nsv574237 Chr.17:3486822 - 3729542 on Build GRCh38 Loss TAX1BP3 GSG2 P2RX5 TRPV3 SPATA22 CTNS SHPK ASPA P2RX5-TAX1BP3 EMC6 TRPV1 ITGAE
nsv1065489 Chr.17:2631416 - 3948349 on Build GRCh38 Gain NCBP3 MIR6776 TAX1BP3 LOC105371591 OR1D2 CAMKK1 ATP2A3 PAFAH1B1 OR3A1 LOC101927911 SPATA22 CTNS OR1A2 SHPK LOC105371592 MIR1253 OR3A4P RAP1GAP2 OR1D4 OR1A1 P2RX1 OR3A2 OR1G1 CCDC92B OR1E1 ASPA P2RX5-TAX1BP3 EMC6 TRPV1 CLUH ITGAE OR3A3 GSG2 P2RX5 TRPV3 OR1D5 OR1E2
esv2662311 Chr.17:3561202 - 3568311 on Build GRCh38 Deletion TRPV1
nsv526175 Chr.17:3528392 - 3616421 on Build GRCh38 Gain TRPV3 SHPK TRPV1
esv3639746 Chr.17:3561030 - 3568136 on Build GRCh38 Loss TRPV1
esv3639748 Chr.17:3562752 - 3573090 on Build GRCh38 Gain TRPV1
nsv1060071 Chr.17:3398474 - 3633472 on Build GRCh38 Loss TRPV3 SPATA22 SHPK ASPA OR1E2 TRPV1 OR3A3

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