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See other TRPV1 CNV Assays ›
Gene Symbol
TRPV1
Assay Reference Genome
Location

Chr.17:3568452 on build GRCh38
Cytoband
17p13.2
Assay ID Hs05502230_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 7442

Gene Name:

 transient receptor potential cation channel subfamily V member 1

Gene Aliases:

 VR1

Location:

 Chr.17:3565446-3609411 on Build GRCh38

Assay Gene Location:

 Within Intron 18
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TRPV1 NM_018727.5 NP_061197.4
NM_080704.3 NP_542435.2
NM_080705.3 NP_542436.2
NM_080706.3 NP_542437.2
AF196175.1 AAG43466.1
AF196176.1 AAG43467.1
AJ272063.2 CAB89866.2
AJ277028.1 CAB95729.1
AL136801.1 CAB66735.1
AY131289.1 AAM89472.1
AY986821.1 AAX84657.1
BC132820.1
BC136633.1
DQ177332.1 ABA06605.1
DQ177333.1 ABA06606.1
DQ898279.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3892950 Chr.17:3131812 - 3577153 on Build GRCh38 Loss OR3A4P ASPA OR1E1 OR1D4 TRPV3 OR1E2 SPATA22 OR1A1 TRPV1 OR1A2 OR3A1 OR3A3 OR3A2
nsv516676 Chr.17:3553441 - 3652130 on Build GRCh38 Gain+Loss TRPV1 CTNS SHPK TRPV3
nsv574237 Chr.17:3486822 - 3729542 on Build GRCh38 Loss TRPV1 CTNS SHPK ASPA GSG2 P2RX5 TRPV3 EMC6 TAX1BP3 SPATA22 P2RX5-TAX1BP3 ITGAE
nsv1065489 Chr.17:2631416 - 3948349 on Build GRCh38 Gain RAP1GAP2 OR3A4P ASPA SPATA22 ITGAE LOC105371592 OR1A1 SHPK GSG2 OR3A1 OR3A3 MIR6776 OR1D5 LOC101927911 OR1D2 ATP2A3 P2RX5-TAX1BP3 CTNS MIR1253 P2RX5 OR1E1 OR1D4 P2RX1 TRPV3 OR1E2 TAX1BP3 CCDC92B LOC105371591 TRPV1 OR1A2 CLUH NCBP3 CAMKK1 EMC6 PAFAH1B1 OR1G1 OR3A2
esv3892951 Chr.17:3566559 - 3597215 on Build GRCh38 Gain TRPV1
nsv1055740 Chr.17:3381841 - 3890153 on Build GRCh38 Gain CTNS ASPA P2RX5 OR1E1 TRPV3 OR1E2 TAX1BP3 SPATA22 ITGAE TRPV1 SHPK GSG2 NCBP3 OR3A3 CAMKK1 EMC6 OR3A2 P2RX5-TAX1BP3
esv3572354 Chr.17:3528675 - 3654158 on Build GRCh38 Gain TRPV1 CTNS SHPK TRPV3
nsv526175 Chr.17:3528392 - 3616421 on Build GRCh38 Gain TRPV1 SHPK TRPV3
esv3639748 Chr.17:3562752 - 3573090 on Build GRCh38 Gain TRPV1
dgv556e214 Chr.17:3560499 - 3573090 on Build GRCh38 Loss TRPV1
nsv1060071 Chr.17:3398474 - 3633472 on Build GRCh38 Loss TRPV1 SHPK ASPA TRPV3 OR3A3 OR1E2 SPATA22

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