Hs05503790_cn

• Gene Symbol: RAB40B
• Assay Reference Genome Location: Chr.17:82675248 on build GRCh38
• Cytoband: 17q25.3

Target Gene Details

• Entrez Gene ID: 10966
• Gene Name: RAB40B, member RAS oncogene family
• Gene Aliases: RAR, SEC4L
• Location: Chr.17:82657067-82698722 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
RAB40B	NM_006822.2			NP_006813.1
	XM_005256334.4			XP_005256391.1
	XM_005256335.3			XP_005256392.1
	XM_017024042.1			XP_016879531.1
	AB209711.1			BAD92948.1
	AL047483.1
	BC018039.1			AAH18039.1
	U05227.1			AAA17031.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1067553	Chr.17:82530808 - 83091923 on Build GRCh38	Loss	WDR45B FN3K FN3KRP LOC101929552 ZNF750 TBCD FOXK2 MIR4525 RAB40B B3GNTL1 LOC105376791 METRNL LOC105371944
nsv833575	Chr.17:82660876 - 82847512 on Build GRCh38	Loss	RAB40B FN3K FN3KRP LOC101929552 ZNF750 LOC105376791 TBCD MIR4525
nsv952395	Chr.17:82663725 - 82745024 on Build GRCh38	Deletion	RAB40B FN3K FN3KRP LOC101929552 LOC105376791 MIR4525
nsv1067362	Chr.17:82569201 - 82681793 on Build GRCh38	Gain	WDR45B RAB40B FOXK2 MIR4525
nsv1062980	Chr.17:82408938 - 82687942 on Build GRCh38	Gain	NARF WDR45B RAB40B HEXDC FOXK2 MIR4525 C17orf62 OGFOD3
nsv428351	Chr.17:81152631 - 83064073 on Build GRCh38	Gain	SLC38A10 FN3KRP UTS2R ASPSCR1 SLC25A10 C17orf89 TEPSIN MIR3186 OXLD1 BAHCC1 CD7 HEXDC FSCN2 MIR6786 WDR45B CEP131 LOC101929511 SECTM1 CSNK1D FASN FOXK2 MCRIP1 ALYREF ANAPC11 MAFG-AS1 NARF PCYT2 RAB40B AATK LINC00482 SNORD134 TEX19 MAFG DCXR SLC16A3 TMEM105 LOC105376790 ARL16 C17orf62 LOC105371944 FAAP100 MIR6787 FN3K MIR4740 LOC100130370 LOC101929552 ZNF750 HGS AATK-AS1 PYCR1 P4HB TBCD CCDC57 RAC3 GCGR NPB B3GNTL1 CCDC137 NPLOC4 STRA13 PPP1R27 OGFOD3 MRPL12 PDE6G GPS1 LRRC45 RFNG TSPAN10 LOC105371925 MIR4525 MYADML2 ARHGDIA SIRT7 LOC105376791 DUS1L ACTG1 NOTUM
nsv509680	Chr.17:82661313 - 82679596 on Build GRCh38	Insertion	RAB40B MIR4525
esv2762577	Chr.17:82244836 - 82838431 on Build GRCh38	Gain+Loss	WDR45B FN3K LOC101929511 FN3KRP SECTM1 UTS2R LOC101929552 CSNK1D ZNF750 TBCD FOXK2 MIR4525 NARF RAB40B TEX19 LOC105376791 CD7 LOC105376790 HEXDC C17orf62 OGFOD3
esv21913	Chr.17:81828123 - 83103548 on Build GRCh38	Gain+Loss	FN3KRP UTS2R ASPSCR1 CD7 METRNL HEXDC WDR45B LOC101929511 SECTM1 CSNK1D FASN FOXK2 MCRIP1 ALYREF ANAPC11 MAFG-AS1 NARF PCYT2 RAB40B SNORD134 TEX19 MAFG DCXR SLC16A3 LOC105376790 C17orf62 LOC105371944 MIR6787 FN3K LOC101929552 ZNF750 PYCR1 P4HB TBCD CCDC57 RAC3 NPB B3GNTL1 STRA13 PPP1R27 OGFOD3 GPS1 LRRC45 RFNG MIR4525 MYADML2 ARHGDIA SIRT7 LOC105376791 DUS1L NOTUM

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

small GTPase mediated signal transduction
protein ubiquitination
symbiont intracellular protein transport in host

Function(s)

GTP binding