Hs05509076_cn

• Gene Symbol: RAB40B
• Assay Reference Genome Location: Chr.17:82666892 on build GRCh38
• Cytoband: 17q25.3

Target Gene Details

• Entrez Gene ID: 10966
• Gene Name: RAB40B, member RAS oncogene family
• Gene Aliases: RAR, SEC4L
• Location: Chr.17:82657067-82698722 on Build GRCh38
• Assay Gene Location: Within Intron 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
RAB40B	NM_006822.2			NP_006813.1
	XM_005256334.4			XP_005256391.1
	XM_005256335.3			XP_005256392.1
	XM_006722271.3			XP_006722334.1
	XM_011523528.2			XP_011521830.1
	XM_017024042.1			XP_016879531.1
	AB209711.1			BAD92948.1
	AL047483.1
	BC018039.1			AAH18039.1
	U05227.1			AAA17031.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1067553	Chr.17:82530808 - 83091923 on Build GRCh38	Loss	ZNF750 TBCD FOXK2 FN3K LOC105371944 LOC101929552 MIR4525 LOC105376791 METRNL WDR45B FN3KRP B3GNTL1 RAB40B
nsv833575	Chr.17:82660876 - 82847512 on Build GRCh38	Loss	ZNF750 TBCD FN3K LOC101929552 FN3KRP MIR4525 RAB40B LOC105376791
nsv952395	Chr.17:82663725 - 82745024 on Build GRCh38	Deletion	FN3K LOC101929552 FN3KRP MIR4525 RAB40B LOC105376791
nsv1067362	Chr.17:82569201 - 82681793 on Build GRCh38	Gain	FOXK2 WDR45B MIR4525 RAB40B
nsv1062980	Chr.17:82408938 - 82687942 on Build GRCh38	Gain	HEXDC OGFOD3 FOXK2 WDR45B MIR4525 RAB40B C17orf62 NARF
nsv428351	Chr.17:81152631 - 83064073 on Build GRCh38	Gain	HEXDC ZNF750 HGS C17orf89 CSNK1D LOC101929552 RFNG MIR6787 MIR4525 RAC3 SNORD134 LOC101929511 OGFOD3 OXLD1 SLC25A10 SIRT7 WDR45B UTS2R NPLOC4 MAFG-AS1 FN3K NOTUM MIR4740 CD7 ASPSCR1 FAAP100 MYADML2 ARL16 RAB40B MIR3186 TBCD TEX19 MAFG TSPAN10 DUS1L FOXK2 LOC100130370 TMEM105 FASN LOC105371944 CCDC137 C17orf62 ANAPC11 NARF PDE6G SLC16A3 SECTM1 ACTG1 STRA13 LOC105371925 PPP1R27 FN3KRP BAHCC1 FSCN2 GCGR DCXR P4HB SLC38A10 ALYREF AATK-AS1 NPB LINC00482 ARHGDIA MCRIP1 LRRC45 LOC105376791 MIR6786 AATK PYCR1 MRPL12 TEPSIN PCYT2 LOC105376790 CCDC57 CEP131 B3GNTL1 GPS1
nsv509680	Chr.17:82661313 - 82679596 on Build GRCh38	Insertion	MIR4525 RAB40B
esv2762577	Chr.17:82244836 - 82838431 on Build GRCh38	Gain+Loss	HEXDC ZNF750 TBCD TEX19 FOXK2 FN3K CSNK1D LOC101929552 MIR4525 C17orf62 NARF LOC105376791 SECTM1 LOC101929511 OGFOD3 CD7 LOC105376790 WDR45B FN3KRP RAB40B UTS2R
esv21913	Chr.17:81828123 - 83103548 on Build GRCh38	Gain+Loss	HEXDC ZNF750 CSNK1D LOC101929552 RFNG MIR6787 MIR4525 RAC3 SNORD134 LOC101929511 OGFOD3 SIRT7 WDR45B UTS2R MAFG-AS1 FN3K NOTUM CD7 ASPSCR1 MYADML2 RAB40B TBCD TEX19 MAFG DUS1L FOXK2 FASN LOC105371944 C17orf62 ANAPC11 NARF SLC16A3 SECTM1 STRA13 METRNL PPP1R27 FN3KRP DCXR P4HB ALYREF NPB ARHGDIA MCRIP1 LRRC45 LOC105376791 PYCR1 PCYT2 LOC105376790 CCDC57 B3GNTL1 GPS1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

small GTPase mediated signal transduction
protein ubiquitination
symbiont intracellular protein transport in host

Function(s)

GTP binding