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See other TRPV1 CNV Assays ›
Gene Symbol
TRPV1
Assay Reference Genome
Location

Chr.17:3569802 on build GRCh38
Cytoband
17p13.2
Assay ID Hs05514805_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 7442

Gene Name:

 transient receptor potential cation channel subfamily V member 1

Gene Aliases:

 VR1

Location:

 Chr.17:3565446-3609411 on Build GRCh38

Assay Gene Location:

 Within Intron 18
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TRPV1 NM_018727.5 NP_061197.4
NM_080704.3 NP_542435.2
NM_080705.3 NP_542436.2
NM_080706.3 NP_542437.2
AF196175.1 AAG43466.1
AF196176.1 AAG43467.1
AJ272063.2 CAB89866.2
AJ277028.1 CAB95729.1
AL136801.1 CAB66735.1
AY131289.1 AAM89472.1
AY986821.1 AAX84657.1
BC132820.1
BC136633.1
DQ177332.1 ABA06605.1
DQ177333.1 ABA06606.1
DQ898279.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3892950 Chr.17:3131812 - 3577153 on Build GRCh38 Loss ASPA OR3A2 SPATA22 TRPV1 OR1E1 TRPV3 OR1D4 OR3A4P OR1A1 OR1A2 OR3A3 OR3A1 OR1E2
nsv516676 Chr.17:3553441 - 3652130 on Build GRCh38 Gain+Loss TRPV3 TRPV1 SHPK CTNS
nsv574237 Chr.17:3486822 - 3729542 on Build GRCh38 Loss ASPA P2RX5 TRPV3 SPATA22 TRPV1 SHPK ITGAE EMC6 TAX1BP3 P2RX5-TAX1BP3 GSG2 CTNS
nsv1065489 Chr.17:2631416 - 3948349 on Build GRCh38 Gain ASPA OR3A2 LOC105371592 SPATA22 CCDC92B CLUH OR1G1 P2RX5-TAX1BP3 NCBP3 GSG2 TRPV3 OR3A4P OR1A1 P2RX1 OR3A3 SHPK ITGAE EMC6 TAX1BP3 MIR6776 LOC101927911 CTNS PAFAH1B1 RAP1GAP2 TRPV1 OR1D5 MIR1253 OR1D2 OR1E1 P2RX5 OR1D4 OR1A2 OR3A1 CAMKK1 OR1E2 ATP2A3 LOC105371591
esv3892951 Chr.17:3566559 - 3597215 on Build GRCh38 Gain TRPV1
nsv1055740 Chr.17:3381841 - 3890153 on Build GRCh38 Gain ASPA OR3A2 SPATA22 TRPV1 P2RX5-TAX1BP3 NCBP3 GSG2 OR1E1 P2RX5 TRPV3 OR3A3 SHPK CAMKK1 ITGAE EMC6 TAX1BP3 OR1E2 CTNS
esv3572354 Chr.17:3528675 - 3654158 on Build GRCh38 Gain TRPV3 TRPV1 SHPK CTNS
nsv526175 Chr.17:3528392 - 3616421 on Build GRCh38 Gain TRPV3 TRPV1 SHPK
esv3639748 Chr.17:3562752 - 3573090 on Build GRCh38 Gain TRPV1
dgv556e214 Chr.17:3560499 - 3573090 on Build GRCh38 Loss TRPV1
nsv1060071 Chr.17:3398474 - 3633472 on Build GRCh38 Loss ASPA TRPV3 SPATA22 TRPV1 OR3A3 SHPK OR1E2

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