Hs05517361_cn

• Gene Symbol: RAB40B
• Assay Reference Genome Location: Chr.17:82662232 on build GRCh38
• Cytoband: 17q25.3

Target Gene Details

• Entrez Gene ID: 10966
• Gene Name: RAB40B, member RAS oncogene family
• Gene Aliases: RAR, SEC4L
• Location: Chr.17:82657067-82698722 on Build GRCh38
• Assay Gene Location: Within Exon 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
RAB40B	NM_006822.2			NP_006813.1
	XM_005256334.4			XP_005256391.1
	XM_005256335.3	3	813	XP_005256392.1
	XM_006722271.3			XP_006722334.1
	XM_011523528.2			XP_011521830.1
	XM_017024042.1			XP_016879531.1
	XM_017024043.1			XP_016879532.1
	AB209711.1			BAD92948.1
	AK124376.1	1	160
	AL047483.1
	BC018039.1			AAH18039.1
	U05227.1			AAA17031.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1067553	Chr.17:82530808 - 83091923 on Build GRCh38	Loss	LOC105376791 ZNF750 LOC105371944 RAB40B FN3K TBCD FOXK2 WDR45B LOC101929552 METRNL MIR4525 B3GNTL1 FN3KRP
nsv833575	Chr.17:82660876 - 82847512 on Build GRCh38	Loss	LOC105376791 ZNF750 LOC101929552 MIR4525 RAB40B FN3K TBCD FN3KRP
esv3641436	Chr.17:82659688 - 82666055 on Build GRCh38	Loss	RAB40B
nsv1067362	Chr.17:82569201 - 82681793 on Build GRCh38	Gain	WDR45B MIR4525 RAB40B FOXK2
nsv1062980	Chr.17:82408938 - 82687942 on Build GRCh38	Gain	C17orf62 WDR45B HEXDC NARF MIR4525 RAB40B OGFOD3 FOXK2
nsv428351	Chr.17:81152631 - 83064073 on Build GRCh38	Gain	HEXDC LOC105371944 FASN CEP131 MRPL12 LRRC45 FN3K LOC101929511 MIR4740 ACTG1 ANAPC11 FOXK2 TEPSIN C17orf62 ARL16 WDR45B LOC101929552 CCDC137 PDE6G MAFG MYADML2 SLC16A3 LINC00482 B3GNTL1 DUS1L LOC105371925 CD7 NPLOC4 RAB40B ALYREF MIR6787 LOC100130370 MAFG-AS1 MIR3186 FAAP100 OGFOD3 NPB C17orf89 SECTM1 ASPSCR1 SIRT7 ARHGDIA NOTUM GCGR TEX19 SLC38A10 LOC105376790 SLC25A10 FSCN2 STRA13 RAC3 SNORD134 OXLD1 PYCR1 MIR4525 GPS1 FN3KRP PCYT2 P4HB CSNK1D LOC105376791 HGS ZNF750 TMEM105 TBCD MIR6786 AATK-AS1 TSPAN10 CCDC57 NARF UTS2R BAHCC1 MCRIP1 AATK RFNG DCXR PPP1R27
nsv509680	Chr.17:82661313 - 82679596 on Build GRCh38	Insertion	MIR4525 RAB40B
esv2762577	Chr.17:82244836 - 82838431 on Build GRCh38	Gain+Loss	TEX19 CSNK1D LOC105376791 CD7 LOC105376790 ZNF750 HEXDC RAB40B FN3K LOC101929511 TBCD FOXK2 C17orf62 WDR45B LOC101929552 NARF UTS2R MIR4525 OGFOD3 SECTM1 FN3KRP
esv21913	Chr.17:81828123 - 83103548 on Build GRCh38	Gain+Loss	HEXDC LOC105371944 FASN LRRC45 FN3K LOC101929511 ANAPC11 FOXK2 C17orf62 WDR45B LOC101929552 MAFG MYADML2 SLC16A3 B3GNTL1 DUS1L CD7 RAB40B ALYREF MIR6787 MAFG-AS1 OGFOD3 NPB SECTM1 ASPSCR1 SIRT7 ARHGDIA NOTUM TEX19 LOC105376790 STRA13 RAC3 SNORD134 PYCR1 MIR4525 GPS1 FN3KRP PCYT2 P4HB CSNK1D LOC105376791 ZNF750 TBCD CCDC57 NARF UTS2R MCRIP1 METRNL RFNG DCXR PPP1R27

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

small GTPase mediated signal transduction
protein ubiquitination
symbiont intracellular protein transport in host

Function(s)

GTP binding