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See other PACSIN2 CNV Assays ›
Gene Symbol
PACSIN2
Assay Reference Genome
Location

Chr.22:42872216 on build GRCh38
Cytoband
22q13.2
Assay ID Hs05564577_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 11252

Gene Name:

 protein kinase C and casein kinase substrate in neurons 2

Gene Aliases:

 SDPII

Location:

 Chr.22:42869766-43015690 on Build GRCh38

Assay Gene Location:

 Within Intron 16
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PACSIN2 NM_001184970.1 NP_001171899.1
NM_001184971.1 NP_001171900.1
NM_007229.3 NP_009160.2
XM_005261319.3 XP_005261376.1
XM_011529846.1 XP_011528148.1
XM_011529847.2 XP_011528149.1
XM_011529848.2 XP_011528150.1
XM_011529849.2 XP_011528151.1
XM_011529850.2 XP_011528152.1
XM_011529851.2 XP_011528153.1
XM_011529852.1 XP_011528154.1
XM_011529853.1 XP_011528155.1
XM_017028562.1 XP_016884051.1
XM_017028563.1 XP_016884052.1
XM_017028564.1 XP_016884053.1
XM_017028565.1 XP_016884054.1
XM_017028566.1 XP_016884055.1
XM_017028567.1 XP_016884056.1
XM_017028568.1 XP_016884057.1
AF128536.1 AAD41781.1
AL136845.1 CAB66779.1
AL389984.1 CAB97538.1
AY007086.1
BC008037.2 AAH08037.1
CR456536.1 CAG30422.1
CR533523.1 CAG38554.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv508738 Chr.22:42839659 - 42917996 on Build GRCh38 Insertion ARFGAP3 PACSIN2

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More Information


Additional Information:

For this assay, SNP(s) [rs77923201] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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