Genomic Map
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Target Gene Details
Entrez Gene ID: | 6872 |
Gene Name: | TATA-box binding protein associated factor 1 |
Gene Aliases: |
BA2R, CCG1, CCGS, DYT3, DYT3/TAF1, KAT4, MRXS33, N-TAF1, NSCL2, OF, P250, TAF(II)250, TAF2A, TAFII-250, TAFII250, XDP |
Location: |
Chr.X:71366220-71530525 on Build GRCh38 |
Assay Gene Location: | Within Intron 3 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| TAF1 | NM_001286074.1 | NP_001273003.1 | ||
| NM_004606.4 | NP_004597.2 | |||
| NM_138923.3 | NP_620278.1 | |||
| NR_104387.1 | ||||
| NR_104388.1 | ||||
| NR_104389.1 | ||||
| NR_104390.1 | ||||
| NR_104391.1 | ||||
| NR_104392.1 | ||||
| NR_104393.1 | ||||
| NR_104394.1 | ||||
| NR_104395.1 | ||||
| XM_005262295.1 | XP_005262352.1 | |||
| XM_005262296.1 | XP_005262353.1 | |||
| XM_005262297.4 | XP_005262354.1 | |||
| XM_005262300.2 | XP_005262357.1 | |||
| XM_006724682.3 | XP_006724745.1 | |||
| AB300418.1 | ||||
| AK310201.1 | ||||
| AW937788.1 | ||||
| BP284702.1 | ||||
| D90359.1 | BAA14374.1 | |||
| X07024.1 | CAA30073.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| esv33082 | Chr.X:70420685 - 71888183 on Build GRCh38 | Loss |
 ZMYM3
CXCR3
ACRC
LOC101059915
KIF4A
FOXO4
CXorf65
INGX
TAF1
SLC7A3
GDPD2
CXorf49
LOC100129291
OGT
TEX11
DLG3-AS1
DLG3
NLGN3
IL2RG
LOC105373244
CXorf49B
SNX12
MED12
ITGB1BP2
LOC100132741
NONO
GJB1
LINC00891
|
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Additional Information:
For this assay, SNP(s) [rs73217060] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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