Genomic Map
Back To TopAssay Details
Target Gene Details
Entrez Gene ID: | 55706 |
Gene Name: | NDC1 transmembrane nucleoporin |
Gene Aliases: |
NET3, TMEM48 |
Location: |
Chr.1:53765460-53838552 on Build GRCh38 |
Assay Gene Location: | Within Intron 17 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| NDC1 | NM_001168551.1 | NP_001162023.1 | ||
| NM_018087.4 | NP_060557.3 | |||
| NR_033142.1 | ||||
| XM_011541766.2 | XP_011540068.1 | |||
| AK001269.1 | BAA91592.1 | |||
| AK001593.1 | ||||
| AK022618.1 | BAB14135.1 | |||
| AK091439.1 | BAC03665.1 | |||
| AK295000.1 | ||||
| AK298909.1 | ||||
| AK302910.1 | ||||
| AL354612.1 | CAB89725.1 | |||
| AL354613.1 | CAB89726.1 | |||
| BC003082.2 | AAH03082.1 | |||
| BX648031.1 | ||||
| DQ141696.1 | AAZ73087.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv1011262 | Chr.1:53542956 - 54106304 on Build GRCh38 | Gain |
 TCEANC2
HSPB11
MIR4781
LDLRAD1
YIPF1
LRRC42
GLIS1
DIO1
NDC1
TMEM59
|
| esv2678912 | Chr.1:53778846 - 53781956 on Build GRCh38 | Deletion |
NDC1
|
| esv3586075 | Chr.1:53778923 - 53781892 on Build GRCh38 | Loss |
NDC1
|
Back To TopMore Information
Additional Information:
For this assay, SNP(s) [rs114978420] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Gene Ontology Categories:
Back To Top